毛白杨CHS基因家族鉴定与表达分析OA
Genome-wide identification and expression analysis of CHS gene family in Populus tomentosa
[目的]鉴定毛白杨(Populus tomentosa)查尔酮合成酶(chalcone synthase,CHS)基因家族成员,探究毛白杨叶片在强光诱导下花青素积累的分子机制,为毛白杨抗逆改良和新品种创制提供基础信息.[方法]通过对毛白杨全基因组数据进行分析,鉴定到12个CHS基因家族成员,并对其进化关系、蛋白结构与理化性质、基因结构与保守基序、启动子顺式作用元件、基因组表达模式,以及强光处理下基因表达水平变化等进行研究.[结果]12个PtoCHSs分布在6条染色体上,除PtoCHS2A具有3个外显子外,其余11个家族成员均具有2个外显子;进化关系相近的成员基因结构和保守基序组成呈现相似性.PtoCHSs具有差异的表达模式,且其基因启动子区域包含多种响应植物激素、光照、干旱、低温等胁迫信号元件,这反映了PtoCHSs基因在毛白杨生长发育及环境适应过程中具有多样化的功能.除 PtoCHS1D和 PtoCHS6A外,其余 10个 PtoCHSs基因均响应强光诱导,其中,PtoCHS6D相对变化幅度最大,提示其和强光诱导下毛白杨叶片花青素积累进而变红过程密切相关.亚细胞定位试验明确了PtoCHS6D定位在内质网.[结论]解析了毛白杨PtoCHS基因家族特征和表达模式,其家族成员序列相对保守,功能具有多样性.其中,PtoCHS2A、PtoCHS3A、PtoCHS3D和PtoCHS6D在根或叶片中的表达丰度及偏好性特征,提示这些基因在根和叶片发育过程中具有重要的生物学功能.
[Objective]To identify the chalcone synthase(CHS)gene family members in Populus tomentosa and explore the molecular mechanism of anthocyanin accumulation in its leaves under strong light induction,providing basic information for the improvement of stress resistance and the creation of new varieties of P.tomentosa.[Method]By analyzing the whole genome data of P.tomentosa,12 CHS family members were identified.Their evolutionary relationships,protein structures and physico-chemical properties,gene structures and conserved motifs,promoter cis-acting elements,gene tissue expression patterns,and changes in gene expression levels under strong light treatment were studied.[Result]The 12 PtoCHSs were distributed on 6 chromosomes.Except for PtoCHS2A which contained 3 exons,the other 11 family members contained 2 exons.Members with close evolutionary relation-ships showed similar gene structures and conserved motif compositions.The PtoCHSs genes had diffe-rent expression patterns,and their gene promoter regions contained multiple elements responding to plant hormones,light,drought,low temperature and other stress signals,indicating that PtoCHS genes have diverse functions in the growth and development of P.tomentosa and its adaptation to the environment.Except for PtoCHS1D and PtoCHS6A,the other 10 PtoCHSs responded to strong light induction,among which PtoCHS6D had the largest relative change,suggesting that it is closely related to the accumulation of anthocyanins and the reddening of P.tomentosa leaves under strong light induc-tion.Subcellular localization experiments confirmed that PtoCHS6D was located in the endoplasmic reticulum.[Conclusion]The characteristics and expression patterns of the PtoCHS gene family in P.tomentosa were analyzed.The sequences of its family members were relatively conserved,and their functions were diverse.The expression abundance and preference characteristics of PtoCHS2A,PtoCHS3A,PtoCHS3D and PtoCHS6D in roots or leaves suggested that these genes have important bio-logical functions in the development of roots and leaves.
吴雪珂;涂赛赛;陈琳;张晴;吴创业;杨佳超;郭朋;曹申全;尚富德
河南农业大学生命科学学院,河南 郑州 450046河南农业大学生命科学学院,河南 郑州 450046河南农业大学生命科学学院,河南 郑州 450046河南农业大学生命科学学院,河南 郑州 450046温县林业科学研究所,河南 焦作 454850温县林业科学研究所,河南 焦作 454850河南农业大学生命科学学院,河南 郑州 450046河南农业大学生命科学学院,河南 郑州 450046河南农业大学生命科学学院,河南 郑州 450046
农业科技
毛白杨查尔酮合成酶基因家族生物信息学基因表达
Populus tomentosachalcone synthasegene familybioinformaticsgene expression
《河南农业大学学报》 2026 (5)
799-810,12
国家自然科学基金项目(32401609)河南省科协'科创中原'行动项目成果-河南省青年人才托举工程(2025HYTP011)河南省高等学校重点科研项目(25A180004)河南省博士后科研项目(HN2023114)
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