Phylogenomic conflict in Moraceae:Evidence for pervasive introgression and incomplete lineage sortingOA
Phylogenomic conflict in Moraceae:Evidence for pervasive introgression and incomplete lineage sorting
Chen-Xuan Yang;Douglas E.Soltis;Pamela S.Soltis;Elliot M.Gardner;Ting-Shuang Yi;Shui-Yin Liu;Qin Tian;Wei Gu;Qing Lu;Robert P.Guralnick;Gregory W.Stull;Heather R.Kates;Ryan A.Folk
Germplasm Bank of Wild Species,Yunnan Key Laboratory of Crop Wild Relatives Omics,Kunming Institute of Botany,Chinese Academy of Sciences,Kunming 650201,China||Kunming College of Life Science,University of Chinese Academy of Sciences,Kunming 650201,China||Key Laboratory of Plant Diversity and Specialty Crops,Chinese Academy of Sciences,Beijing 100093,ChinaFlorida Museum of Natural History,University of Florida,Gainesville,FL 32611,USA||Department of Biology,University of Florida,Gainesville,FL 32611,USAFlorida Museum of Natural History,University of Florida,Gainesville,FL 32611,USADepartment of Biology,Case Western Reserve University,Cleveland,OH 44106,USAGermplasm Bank of Wild Species,Yunnan Key Laboratory of Crop Wild Relatives Omics,Kunming Institute of Botany,Chinese Academy of Sciences,Kunming 650201,China||Kunming College of Life Science,University of Chinese Academy of Sciences,Kunming 650201,China||Key Laboratory of Plant Diversity and Specialty Crops,Chinese Academy of Sciences,Beijing 100093,ChinaShenzhen Branch,Guangdong Laboratory of Lingnan Modern Agriculture,Key Laboratory of Synthetic Biology,Ministry of Agriculture and Rural Affairs,Agricultural Genomics Institute at Shenzhen,Chinese Academy of Agricultural Sciences,Shenzhen 518000,ChinaGermplasm Bank of Wild Species,Yunnan Key Laboratory of Crop Wild Relatives Omics,Kunming Institute of Botany,Chinese Academy of Sciences,Kunming 650201,China||Kunming College of Life Science,University of Chinese Academy of Sciences,Kunming 650201,China||Key Laboratory of Plant Diversity and Specialty Crops,Chinese Academy of Sciences,Beijing 100093,ChinaGermplasm Bank of Wild Species,Yunnan Key Laboratory of Crop Wild Relatives Omics,Kunming Institute of Botany,Chinese Academy of Sciences,Kunming 650201,China||Kunming College of Life Science,University of Chinese Academy of Sciences,Kunming 650201,China||Key Laboratory of Plant Diversity and Specialty Crops,Chinese Academy of Sciences,Beijing 100093,ChinaGermplasm Bank of Wild Species,Yunnan Key Laboratory of Crop Wild Relatives Omics,Kunming Institute of Botany,Chinese Academy of Sciences,Kunming 650201,China||Kunming College of Life Science,University of Chinese Academy of Sciences,Kunming 650201,China||Key Laboratory of Plant Diversity and Specialty Crops,Chinese Academy of Sciences,Beijing 100093,ChinaFlorida Museum of Natural History,University of Florida,Gainesville,FL 32611,USADepartment of Botany,National Museum of Natural History,Smithsonian Institution,Washington DC 20013,USAFlorida Museum of Natural History,University of Florida,Gainesville,FL 32611,USADepartment of Biological Sciences,Mississippi State University,Mississippi State,MS 39762,USA
Incomplete lineage sortingIntrogressionMoraceaePhylogenomicsPhylogenetic discordanceTaxonomic revision
Incomplete lineage sortingIntrogressionMoraceaePhylogenomicsPhylogenetic discordanceTaxonomic revision
《植物多样性（英文）》 2026 (4)
688-703,16
This research was supported by the Yunnan Revitalization Talent Support Program:Yunling Scholar Project(XDYC-YLXZ-2024-0021),the Basic Research Project of Yunnan Province(No.202401BC070001),the National Natural Science Foundation of China,key international(regional)cooperative research project(No.31720103903),the Yunling International High-end Experts Program of Yunnan Province,China(No.YNQR-GDWG-2017-002 and No.YNQR-GDWG-2018-012).We are grateful to the following institutes for providing specimens or silica-dried materials:Her-barium of Kunming Institute of Botany,Chinese Academy of Sci-ences(KUN)the Germplasm Bank of Wild Species and Molecular Biology Experiment Center,Kunming Institute of Botany,Chinese Academy of Sciencesthe herbarium of the California Academy of Sciencesthe Missouri Botanical Gardenthe New York Botanical Gardenthe Ohio State University Herbariumand the University of Texas Herbarium.We are also grateful to Jia-Jin Wu for help with samplingto Hua-Feng Wang,Diego F.Morales-Briones,Nelson Zamora Villalobos,Rong Zhang,Hui Liu,Si-Yun Chen,Xiao-Gang Fu,Ying-Ying Yang,and Henrique Borges Zamengo for their generous technical support and valuable assistanceto Shuai Liao for assistance in identifying specimensand to the iFlora High Performance Computing Center of the Germplasm Bank of Wild Species(iFlora HPC Center of GBOWS,KIB,CAS)for computing.We appreciate the photos provided by Qin Tian of the Honghe Tropical Agriculture Institute of Yunnan,China.
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