基于铁代谢相关基因评分的"气血-脏腑"证候量化模型探索OA
Exploring a Quantitative Model for"Qi-Blood"and"Zang-Fu"Pattern Differentiation Based on Iron Metabolism-Related Gene Scores
目的 通过比较"全铁代谢基因评分"与"疾病特异性交集基因评分"在六种疾病中的差异,探索铁代谢相关基因评分在中医"气血-脏腑"证候量化评估中的应用价值.方法 从GEO数据库获取乳腺癌、胰腺癌、阿尔茨海默病(Alzheimer's disease,AD)、重度抑郁症(Major depressive disorder,MDD)、急性肾损伤(Acute kidney injury,AKI)和脑膜炎的转录组数据,整合775个铁代谢相关基因.采用limma包进行差异分析,利用ssGSEA算法分别计算全体基因评分和交集基因评分,比较两种评分策略的疾病鉴别效能,并进行富集分析.结果 全体基因评分仅在乳腺癌中显示显著差异(P<0.01),其余五种疾病均无统计学意义.交集基因评分在乳腺癌(P=4.75×10-17)、胰腺癌(P<0.001)、AD(P=2.73×10-11)、MDD(P<0.001)和脑膜炎(P<0.01)中均能显著区分疾病组与对照组,仅AKI无显著性.乳腺癌主要富集于HIF-1信号通路,胰腺癌主要富集于铁死亡通路,AD主要富集于氧化磷酸化通路,MDD涉及细胞色素P450代谢通路,AKI涉及IL-17信号通路,脑膜炎涉及mTOR信号通路.结论 全铁代谢基因评分反映机体"气血"整体背景,敏感性较低;交集基因评分反映疾病状态下特定"脏腑"的铁代谢局部失调,敏感性较高.两种评分的差异化表现提示,铁代谢基因评分可作为连接宏观气血-脏腑理论与微观分子证据的量化桥梁,为中医证候客观化评估提供新思路.
Objective To explore the application value of iron metabolism-related gene scores in the quantitative assessment of"Qi-Blood"and"Zang-Fu"patterns in traditional Chinese medicine(TCM)by comparing the differences between global iron metabolism gene scores and disease-specific intersection gene scores across six diseases.Methods Transcriptomic data for breast cancer,pancreatic cancer,Alzheimer's disease(AD),major depressive disorder(MDD),acute kidney injury(AKI),and meningitis were obtained from the GEO database.A total of 775 iron metabolism-related genes were compiled.Differential expression analysis was performed using limma,and gene scores were calculated separately using the global gene set and the disease-specific intersect gene sets via ssGSEA.The discriminative performance of the two scoring strategies was compared,and enrichment analyses were conducted using clusterProfiler.Results The global iron metabolism gene score showed a significant difference only in breast cancer(P<0.01),with no statistical significance in the other five diseases.In contrast,the disease-specific intersect gene score significantly distinguished disease from control groups in breast cancer(P=4.75×10-17),pancreatic cancer(P<0.001),AD(P=2.73×10-11),MDD(P<0.001),and meningitis(P<0.01),but not in AKI.Breast cancer was enriched in the HIF-1 pathway,pancreatic cancer in ferroptosis,AD in oxidative phosphorylation,MDD in cytochrome P450,AKI in IL-17,and meningitis in mTOR signaling.Conclusion The global iron metabolism gene score reflects the overall"Qi-Blood"background of the body with relatively low sensitivity,whereas the disease-specific intersect gene score reflects local iron metabolic dysregulation in specific"Zang-Fu"organs under disease conditions,exhibiting higher sensitivity.The differential performance of these two scoring approaches suggests that iron metabolism-related gene scores may serve as a quantitative bridge linking the macro-level theory of Qi-Blood and Zang-Fu to micro-level molecular evidence,offering new insights for the objective evaluation of TCM patterns.
徐晓玲;蔡小瑜;石怡
浙江树人学院 树兰国际医学院 杭州 310015上海中医药大学附属龙华医院 上海 200032上海中医药大学附属龙华医院 上海 200032
医药卫生
铁代谢基因评分气血理论脏腑辨证生物信息学
Iron metabolismGene scoresQi-Blood theoryZang-Fu pattern differentiationBioinformatics
《世界科学技术-中医药现代化》 2026 (9)
2898-2911,14
国家自然科学基金面上项目(82372109):铁蛋白归巢纳米给药系统介导的肿瘤自发性铁自噬和免疫的协同治疗作用研究,负责人:徐晓玲国家自然科学基金青年项目(82505247):升降散及其有效成分姜黄素通过PSMD3抑制NLRP3介导的细胞焦亡治疗脓毒症的机制研究,负责人:石怡上海中医药大学"访名校拜名师"杏林传承计划(rs202601),负责人:石怡.
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