玉米氮利用效率全基因组关联分析及候选基因挖掘OA
Genome-wide association study of nitrogen use efficiency and candidate gene mining in maize
氮素是影响玉米产量的关键因子.为解析玉米氮响应的遗传基础,本研究利用 312 份玉米自交系组成的自然群体,通过全基因组关联分析(GWAS)对产量相关性状氮响应系数(NRI)进行研究.结果表明,在 2 种氮条件下产量相关性状均具有丰富的表型变异;不同杂种优势群产量的氮响应系数(NRIGY)及产量具有显著差异,与其他杂种优势群相比,Iodent群的NRIGY最高,SPT群的耐低氮性最强.全基因组关联分析共挖掘到 1582 个与NRI显著相关的位点,其中 352 个位点位于已报道的氮高效QTLs置信区间内.显著关联位点中共包含 372 个候选基因,主要与玉米的生长发育和逆境胁迫相关.关键候选基因单倍型分析结果表明,Zm00001d021701 的TT单倍型行粒数的氮响应系数低于CC,但在正常氮和低氮条件下产量均高于CC;Zm00001d037229 的AA单倍型穗位高的氮响应系数高于GG,且在 2 种氮水平下产量均优于GG.本研究系统揭示了玉米氮响应的遗传基础,鉴定的关键候选基因及其优异单倍型为玉米氮高效分子育种提供了重要的基因资源和理论支撑.
Nitrogen is a key factor influencing maize yield.To dissect the genetic basis of nitrogen response in maize,this study utilized a natural population consisting of 312 maize inbred lines and employed genome-wide association analysis(GWAS)on the nitrogen response index(NRI)of yield-related traits.The results indicated that yield-related traits exhibited abundant phenotypic variation under both nitrogen conditions.Significant differences in nitrogen response index of grain yield(NRIGY)and grain yield were observed among different heterotic groups;compared with other groups,the Iodent group displayed the highest NRIGY,while the SPT group exhibited the strongest low-nitrogen tolerance.Genome-wide association analysis identified a total of 1582 significant loci associated with NRI,of which 352 loci were located within the confidence intervals of previously reported nitro-gen-efficient QTLs.These significantly associated loci comprised 372 candidate genes,primarily involved in maize growth,de-velopment,and stress responses.Haplotype analysis of key candidate genes revealed that,the TT haplotype of Zm00001d021701 had a lower nitrogen response coefficient for kernel number per row than CC,but exhibited higher yield than CC under both nor-mal and low nitrogen conditions;the AA haplotype of Zm00001d037229 had a higher nitrogen response coefficient for ear height than GG,and outperformed GG in yield under both nitrogen levels.This study systematically elucidated the genetic architecture of nitrogen response in maize,and the identified key candidate genes along with their elite haplotypes provide important genetic resources and theoretical support for molecular breeding of nitrogen-efficient maize varieties.
黄迎;黎裕;周涛;廖江林;李春辉;张登峰;刘沛琦;解森;许洛;任元;刘旭洋;何冠华;李永祥;王天宇
江西农业大学作物生理生态与遗传育种教育部重点实验室,江西 南昌 330045||作物基因资源与育种全国重点实验室/中国农业科学院作物科学研究所,北京 100081作物基因资源与育种全国重点实验室/中国农业科学院作物科学研究所,北京 100081江西省农喜农业科技有限公司,江西 吉安 343222江西农业大学作物生理生态与遗传育种教育部重点实验室,江西 南昌 330045作物基因资源与育种全国重点实验室/中国农业科学院作物科学研究所,北京 100081作物基因资源与育种全国重点实验室/中国农业科学院作物科学研究所,北京 100081作物基因资源与育种全国重点实验室/中国农业科学院作物科学研究所,北京 100081||河北北方学院农林科技学院,河北 张家口 075000作物基因资源与育种全国重点实验室/中国农业科学院作物科学研究所,北京 100081||黑龙江大学现代农业与生态环境学院,黑龙江 哈尔滨 150080石家庄市农林科学研究院,河北 石家庄 050041山西农业大学农业基因资源研究中心,山西 太原 030031作物基因资源与育种全国重点实验室/中国农业科学院作物科学研究所,北京 100081作物基因资源与育种全国重点实验室/中国农业科学院作物科学研究所,北京 100081作物基因资源与育种全国重点实验室/中国农业科学院作物科学研究所,北京 100081作物基因资源与育种全国重点实验室/中国农业科学院作物科学研究所,北京 100081
玉米产量氮响应全基因组关联分析候选基因
maizegrain yieldnitrogen responsegenome-wide association analysiscandidate genes
《作物学报》 2026 (9)
2558-2572,15
本研究由国家重点研发计划项目(2021YFD1200700),贵州省毕节市高产玉米品种筛选及机械化种植关键技术集成与示范(2023-5),河北省石家庄市氮高效玉米优异种质创新及利用项目(242490262A),财政部和农业农村部国家现代农业产业技术体系建设专项(玉米,CARS-02-04)和中国农业科学院创新工程资助.This study was supported by the National Key Research and Development Program of China(2021YFD1200700),the High-yield Maize Variety Screening and Key Technology Integration and Demonstration for Mechanized Planting in Bijie City,Guizhou Province(2023-5),the Elite Germplasm Innovation and Utilization Project of Nitrogen-Efficient Maize in Shijiazhuang City,Hebei Province(242490262A),the China Agriculture Research System of MOF and MARA(Maize,CARS-02-04),and the Innovation Program of the Chinese Academy of Ag-ricultural Sciences.
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