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樟树ARF基因家族的全基因组鉴定与表达分析OA

Genome-wide Identification and Expression Analysis of the ARF Gene Family in Cinnamomum camphora

中文摘要英文摘要

生长素响应因子(ARF)作为植物特异性转录因子,在感知生长素信号及调控花发育、侧根形成、胁迫响应及次生代谢产物积累等多种生物学过程中发挥关键作用.然而,樟树(Cinnamomum camphora)作为一种具有重要药用和芳香价值的经济树种,其ARF基因家族的功能尚不明确.通过生物信息学方法在全基因组范围内鉴定出24个CcARF基因,将其划分为5个亚类,这些基因不均匀分布于12条染色体上.保守基序与基因结构分析显示,同一亚类内高度保守.启动子顺式作用元件分析表明,这些基因参与多种激素及胁迫响应.表达谱分析揭示其表达具有组织特异性,主要集中于茎中.共表达分析发现,多个CcARF基因与关键萜烯合酶基因(如龙脑基二磷酸合酶基因CcTPS72和芳樟醇合酶基因CcTPS74)呈高度共表达,提示这些转录因子可能参与调控具有重要经济价值的单萜成分——龙脑和芳樟醇的生物合成.

Auxin response factors(ARF),as plant-specific transcription factors,play key roles in per-ceiving auxin signals and regulating various biological processes,including flower development,later-al root formation,stress responses,and secondary metabolite accumulation.However,the functions of the ARF gene family in Cinnamomum camphora,an economically important tree species with sig-nificant medicinal and aromatic value,remained poorly understood.Through bioinformatics approa-ches,24 CcARF genes were identified at the genome-wide level and classified into 5 subgroups,which were unevenly distributed across 12 chromosomes.Analysis of conserved motifs and gene structures revealed high conservation within the same subgroup.Cis-acting element analysis of the promoters in-dicated that these genes were involved in multiple hormone and stress responses.Expression profiling revealed tissue-specific expression patterns,predominantly concentrated in stems.Co-expression anal-ysis showed that several CcARF genes were highly co-expressed with key terpene synthase genes,such as the borneol diphosphate synthase gene CcTPS72 and the linalool synthase gene CcTPS74,suggesting that these transcription factors could be involved in regulating the biosynthesis of the eco-nomically important monoterpenes,borneol and linalool,in Cinnamomum camphora.

余丽娴;方志强;杨泽锐

广东药科大学附属第一医院临床药学重点专科,广州 510000广东创新科技职业学院医药健康学院,广东东莞 523960广东药科大学附属第一医院临床药学重点专科,广州 510000||广东药科大学中药学院,广州 511436

农业科技

樟树全基因组鉴定ARF家族龙脑芳樟醇生长素响应因子萜烯生物合成

Cinnamomum camphoragenome-wide identificationARF familyborneollinaloolauxin response factorterpene biosynthesis

《种子》 2026 (8)

23-33,11

国家自然科学基金青年基金项目(82304657)2025-2026年度广东省科协青年科技人才培育计划(SKXRC2025150)

10.16590/j.cnki.1001-4705.2026.08.023

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