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水稻PR1基因家族的鉴定与生物信息学分析OA

Identification and Bioinformatics Analysis of the PR1 Gene Family in Rice

中文摘要英文摘要

病程相关蛋白1(PR1)家族在植物防御机制中扮演着关键角色.为了深入理解水稻(Oryza sativa)PR 1基因家族的功能和特性,利用生物信息学方法对水稻基因组中的PR1基因家族成员进行了全面的鉴定和分析.结果表明,共鉴定出27个水稻PR1基因,其编码蛋白的氨基酸数量为51~418个,理论等电点在4.23~10.57之间,相对分子量为5 345.94~4 3345.60 Da.这些蛋白主要定位于细胞外和叶绿体,二级结构以无规则卷曲为主,磷酸化位点主要集中在丝氨酸残基.PR1基因分布在水稻的8条染色体上,其中7号染色体包含11个基因.保守基序Motif1和Motif2在所有成员中高度保守,而外显子和内含子的数量存在差异.激素响应元件(占39.38%)和光响应元件(占37.62%)占据主导地位,尤其茉莉酸甲酯(MeJA)响应元件出现频率最高.系统进化分析将PR1蛋白分为8个主要类群.水稻PR1基因家族与玉米PR1家族具有较高的同源性,且进化途径保守.PR1家族基因在不同组织中表现出明显分化.

The pathogenesis-related protein 1(PR1)family plays a key role in plant defense mecha-nisms.To gain a deeper understanding of the functions and characteristics of the PR1 gene family in rice(Oryza sativa L.),bioinformatics methods were employed to comprehensively identify and ana-lyze the members of the PR1 gene family in the rice genome.The results showed that a total of 27 rice PR1 genes were identified,encoding proteins ranging from 51 to 418 amino acids in length,with theo-retical isoelectric points between 4.23 and 10.57 and relative molecular masses ranging from 5 345.94 to 43 345.60 Da.These proteins were primarily localized in the extracellular space and chloroplasts,with random coils dominating their secondary structures,and phosphorylation sites were mainly con-centrated on serine residues.The PR1 genes were distributed across eight chromosomes of rice,with chromosome 7 containing 11 genes.Conserved motifs Motif1 and Motif2 were highly conserved in all members,whereas the numbers of exons and introns varied.Hormone-responsive elements(39.38%)and light-responsive elements(37.62%)were predominant,with the methyl jasmonate(MeJA)-re-sponsive element showing the highest frequency.Phylogenetic analysis classified the PR1 proteins into 8 major groups.The PR1 gene family of rice showed high homology with that of maize,and the evolu-tionary pathway was conserved.The PR1 family genes exhibited marked differentiation across differ-ent tissues.

梁传晶;付鸿雁;秦建权;宋晓燕;赵全志

贵州大学农学院/水稻产业技术研究院,贵阳 550025贵州大学农学院/水稻产业技术研究院,贵阳 550025贵州大学农学院/水稻产业技术研究院,贵阳 550025贵州大学农学院/水稻产业技术研究院,贵阳 550025||贵州大学酿酒与食品工程学院,贵阳 550025贵州大学农学院/水稻产业技术研究院,贵阳 550025

生物科学

水稻PR1基因家族生物信息学

Oryza sativa L.PR1gene familybioinformatics

《种子》 2026 (8)

1-10,22,11

国家自然科学基金(32472225)国家重点研发计划(2024YFD2300403)国家重点研发计划(2023YFD2302600)从江梯田湿地生态系统贵州省野外科学观测研究站(黔科合平台YWZ[2024]004)

10.16590/j.cnki.1001-4705.2026.08.001

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