基于网络毒理学和分子对接技术研究双酚A对骨代谢的影响OA
Effects of bisphenol A on bone metabolism based on network toxicology and molecular docking techniques
目的 应用网络毒理学和分子对接技术来探究双酚 A(bisphenol A,BPA)影响骨代谢的分子机制.方法 通过整合ChEMBL、STITCH、SwissTargetPrediction 药物靶点数据库和GeneCards、OMIM、TTD 疾病相关数据库的数据,最终筛选出 BPA 暴露和骨代谢显著相关的潜在靶点.随后通过 STRING 和 Cytoscape 软件进行分析,确定核心靶点.在 DAVID 数据库中,运用基因本体论(gene ontology,GO)和京都基因与基因组百科全书(Kyoto encyclopedia of genes and genomes,KEGG)通路的综合分析得到 BPA 影响骨代谢的核心靶点主要富集的相关通路.随后,将 5 个核心靶点进行分子对接验证.结果 分析确定了 BPA 影响骨代谢的92 个潜在靶点,通过 STRING 和 Cytoscape 进一步确定 5 个与骨代谢相关的核心基因:KRAS、CYP1A1、TNF、JAK2、UGT2B17.富集分析共获得 BPA 诱导的骨代谢异常的 87 个生物过程(biological processes,BP)、32 个细胞成分(cellular components,CC)、109 个分子功能(molecular functions,MFs)、86 条相关信号通路.分子对接证明 BPA 与核心基因之间有高结合亲和力.结论 BPA 可能通过干扰转化生长因子-β(transforming growth factor-beta,TGF-β)、丝裂原活化蛋白激酶(mitogen-activated protein kinase,MAPK)等信号通路及类固醇激素生物合成的相关途径影响骨代谢过程.
Objective To explore the molecular mechanism underlying the effects of bisphenol A(BPA)on bone metabolism via network toxicology and molecular docking approaches.Methods By integrating data from the ChEM-BL,STITCH and SwissTargetPrediction drug target databases and GeneCards,OMIM and TTD disease-related databases,potential targets that were significantly associated with both BPA exposure and bone metabolism were screened out.Subse-quently,the core targets were identified by STRING and Cytoscape software.In the DAVID database,a comprehensive analysis of gene ontology(GO)and Kyoto encyclopedia of genes and genomes(KEGG)pathways was applied to obtain the relevant pathways that were mainly enriched in the core targets of BPA affecting bone metabolism.Subsequently,the five core targets were validated by molecular docking.Results A total of 92 potential targets of BPA affecting bone metabolism were identified,and five core genes related to bone metabolism were further identified by STRING and Cytoscape:KRAS,CYP1A1,TNF,JAK2 and UGT2B17.The enrichment analysis yielded a total of 87 biological processes(BPs),32 cellular components(CCs),109 molecular functions(MFs)and 86 signaling pathways associated with BPA-induced bone metabolism abnormalities.Molecular docking demonstrated a high binding affinity between BPA and the core genes.Conclusion BPA may affect bone metabolism through signaling pathways such as transforming growth factor-beta(TGF-β),mitogen-activated protein kinase(MAPK)and steroid hormone biosynthesis.
邓恩甲;胡继红;高俊;韩亚澎;钮云伟
213003 江苏常州,南京中医药大学附属常州市中医医院中医正骨科213001 江苏常州,南京医科大学第三附属医院常州二院Ⅰ期临床试验中心213003 江苏常州,南京中医药大学附属常州市中医医院中医正骨科213003 江苏常州,南京中医药大学附属常州市中医医院中医正骨科213003 江苏常州,南京中医药大学附属常州市中医医院中医正骨科
医药卫生
双酚A骨代谢网络毒理学分子对接作用机制
bisphenol Abone metabolismnetwork toxicologymolecular dockingmechanism of action
《中华骨质疏松和骨矿盐疾病杂志》 2026 (4)
513-524,12
国家自然科学基金(82374479)第七批全国老中医药专家学术经验继承工作指导老师及继承人项目(国中医药人教函[2022]76号)第四批江苏省名老中医药专家传承工作室建设项目(苏中医科教[2021]7号)江苏省中医药科技发展计划项目(MS2022079)
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