基于RNA测序技术探究中性粒细胞在酒精性肝病中的作用及机制OA
RNA-seq-based analysis of neutrophil function and mechanisms in alcoholic liver disease
目的 利用RNA测序(RNA sequencing,RNA-seq)来研究肝脏中性粒细胞在酒精性肝病(alcoholic liver disease,ALD)的发病和进展过程中的作用,并寻找防治ALD的潜在新靶点.方法 采用Gao-binge造模法建立小鼠ALD模型,利用原位灌流技术提取肝脏中性粒细胞.对分选出的中性粒细胞进行RNA-seq分析,并通过生物信息学平台进行差异表达分析、基因本体论(gene ontology,GO)功能富集分析、京都基因与基因组(Kyoto encyclopedia of genes and genomes,KEGG)富集分析及蛋白互作网络(protein-protein interaction,PPI)分析.通过实时定量聚合酶链式反应(quantitative real-time polymerase chain reaction,qRT-PCR)和蛋白免疫印迹法(Western blot)验证关键基因的表达,并利用免疫组化和免疫荧光等技术评估肝脏中性粒细胞的浸润程度及关键基因的表达变化.结果 与对照组相比,ALD小鼠肝脏中性粒细胞转录谱发生明显变化,共鉴定出662个差异表达基因(differ-entially expressed genes,DEGs),其中 419个基因上调,243 个基因下调.这些DEGs主要富集于细胞代谢、生物调节等相关通路.通过PPI分析筛选出核心枢纽基因钙结合蛋白4(calcium binding protein S100A4,S100A4),实验验证结果表明,模型组中S100A4 mRNA及蛋白水平均明显上调.结论 揭示了 ALD小鼠肝脏中性粒细胞的转录组特征变化,发现S100A4在ALD小鼠肝脏中明显高表达,可能参与疾病的发生与发展,为ALD的防治提供新靶点、新思路.
Aim To explore the role of hepatic neutro-phils in the pathogenesis and progression of alcoholic liver disease(ALD)using RNA sequencing(RNA-seq),and to identify the potential therapeutic targets for ALD prevention and treatment.Methods An alcohol-induced liver injury model was established in mice using the Gao-binge method.Hepatic neutrophils were isolated via in situ perfusion and analyzed by RNA-seq.Bioinformatic analyses,including differen-tial gene expression,gene ontology(GO),Kyoto ency-clopedia of genes and genomes(KEGG),and protein-protein interaction(PPI)network analyses,were per-formed.Quantitative real-time PCR(qRT-PCR)and Western blot were employed to validate key genes.Im-munohistochemistry and immunofluorescence were used to assess neutrophil infiltration and gene expres-sion in liver tissue.Results Compared with controls,neutrophils from ALD mice exhibited significant tran-scriptomic alterations,with 662 differentially ex-pressed genes(419 upregulated and 243 downregu-lated).These genes were mainly enriched in meta-bolic and regulatory pathways.PPI analysis identified S100A4 as a central hub gene,whose mRNA and pro-tein levels markedly increased in ALD neutrophils.Conclusions RNA-seq and integrative bioinformat-ics analyses reveal profound transcriptomic reprogram-ming of hepatic neutrophils in ALD.S100A4 is signifi-cantly upregulated and may contribute to ALD patho-genesis,providing a potential molecular target for its prevention and therapy.
王璐;宫朋朋;赵雨欣;李小枫;李俊;孙莹茵
安徽医科大学第一附属医院肿瘤内科,安徽 合肥 230022安徽医科大学第一附属医院肿瘤内科,安徽 合肥 230022安徽医科大学第一附属医院肿瘤内科,安徽 合肥 230022安徽医科大学药学科学学院,安徽 合肥 230032安徽医科大学药学科学学院,安徽 合肥 230032安徽医科大学第一附属医院肿瘤内科,安徽 合肥 230022
医药卫生
酒精性肝病RNA测序中性粒细胞KEGG富集分析GO富集分析钙结合蛋白4
alcoholic liver diseaseRNA sequenc-ingneutrophilsKEGG enrichment analysisGO en-richment analysisS100A4
《中国药理学通报》 2026 (9)
1660-1667,8
安徽省自然科学基金资助项目(No 2508085MH193)
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