首页|期刊导航|西南农业学报|加拿大披碱草AP2/ERF基因家族的生物信息学分析及干旱胁迫下表达分析

加拿大披碱草AP2/ERF基因家族的生物信息学分析及干旱胁迫下表达分析OA

Bioinformatic analysis of AP2/ERF gene family and its expression analysis under drought condition in Elymus canadensis

中文摘要英文摘要

[目标]探究加拿大披碱草(Elymus canadensis L.)中 AP2/ERF 基因对干旱胁迫的响应.[方法]基于转录组数据,通过生物信息学方法筛选并鉴定加拿大披碱草 AP2/ERFs 基因家族成员,并对该家族基因在干旱胁迫下的差异表达基因的表达模式进行分析.[结果]从加拿大披碱草中鉴定到 45 个 EcAP2/ERFs 基因,编码区序列长度为 288~1302 bp;蛋白质序列长度为 99~395 aa;蛋白质分子量大小为46463.55~10762.33 Da;理论等电点范围为 4.20~11.37.理化性质分析表明,加拿大披碱草 23 个EcAP2/ERFs 为碱性蛋白质,22 个为酸性蛋白质;脂肪系数为58.88~89.94;2 个为不稳定蛋白质,43 个为稳定蛋白质;23 个加拿大披碱草 EcAP2/ERFs 蛋白质均呈疏水性,主要定位于细胞核.6 个加拿大披碱草 AP2/ERFs 家族基因在干旱胁迫中的表达上调,表明可能为响应干旱胁迫的关键基因.[结论]本研究可为加拿大披碱草 AP2/ERF 基因家族成员响应干旱胁迫响应方面的进一步研究提供参考.

[Objective]The study aims to explore the response of the AP2/ERF gene family to drought stress in Elymus canadensis L.[Meth-od]Based on transcriptome sequencing data,genome-wide identification and bioinformatic analysis of the AP2/ERF gene family in Elymus canadensis L.were performed.The expression patterns of differentially expressed AP2/ERF genes under drought stress were further investiga-ted.[Result]The results showed that 45 EcAP2/ERF genes were identified in E.canadensis.Their coding region sequences ranged from 288 to 1302 bp in length,their protein sequences ranged from99 to 395 amino acids(aa)in length,their protein molecular weights ranged from 46 463.55 to10 762.33 Da,and their theoretical isoelectric points ranged from4.20 to11.37.Physicochemical property analyses revealed that 23 EcAP2/ERFs were basic proteins,22 were acidic proteins,2 were unstable proteins,and 43 were stable proteins.All proteins were hy-drophobic and primarily localized in the nucleus.The expression of 6 ECAP2/ERF family genes increased in response to drought stress,sug-gesting they may be key genes in the response to drought stress.[Conclusion]The results of the study can provide a reference for further re-search on drought stress response of AP2/ERF gene family members in E.canadensis.

宗海龙;李小雷;贾学宇;鲍红春;于卓

内蒙古农业大学农学院,呼和浩特 010019内蒙古农业大学农学院,呼和浩特 010019内蒙古农业大学农学院,呼和浩特 010019内蒙古自治区农牧业技术推广中心,呼和浩特 010010内蒙古农业大学农学院,呼和浩特 010019

农业科技

加拿大披碱草AP2/ERF干旱胁迫生物信息学

Elymus canadensisAP2/ERFDrought stressBioinformatics

《西南农业学报》 2026 (7)

1437-1447,11

国家自然科学基金项目(31960344)

10.16213/j.cnki.scjas.2026.7.002

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