首页|期刊导航|农业与技术|基于16S rRNA扩增子序列分析艾草根际土壤微生物群落多样性和功能预测

基于16S rRNA扩增子序列分析艾草根际土壤微生物群落多样性和功能预测OA

Study of Rhizosphere Soil Microbial Community Diversity and Functional Prediction of Artemisia argyi Based on 16S rRNA Amplicon Sequencing

中文摘要英文摘要

为明确艾草根际与非根际土壤细菌群落结构及多样性差异,本研究采用Illumina高通量测序技术结合PICRUSt2功能预测,分析甘肃榆中艾草根际土壤微生物特征.结果显示,测序共获得平均原始序列714006条,平均长度417bp,样本覆盖度均超 99.71%.Alpha 多样性指数 Simpson、Shannon、Chao1、Observed species、Pielou_e 分别为0.99、9.96、32418.0、32206.5、0.86.放线菌门(Actinomycetota)为所有样本最优势菌门,在两年生艾草根际显著富集,优势菌门还包括变形菌门(Pseudomonadota)、厚壁菌门(Bacillota);优势菌目为微球菌目(Micrococcales)、根瘤菌目(Rhizobiales),优势菌属为(Rhizobium)、溶杆菌属(Lysobacte)和芽孢杆菌属(Bacillus).主成分分析表明,艾草根际与非根际微生物群落差异显著,种植艾草可显著提升土壤微生物群落多样性与均匀度.功能预测显示,菌群在KEGG一级通路中新陈代谢丰度最高,COG功能集中于膜转运、翻译、DNA复制、信号转导、氨基酸/碳水化合物代谢及次级代谢产物合成.本研究为艾草连作障碍防控与根际微环境调控提供理论依据.

To clarify the differences in bacterial community structure and diversity between rhizosphere and non-rhizosphere soils of Artemisia argyi,Illumina high-throughput sequencing combined with PICRUSt2 functional prediction were used to analyze microbial characteristics of A.argyi rhizosphere soil in Yuzhong,Gansu.The results showed that an average of 714,006 raw sequences with an average length of 417 bp were obtained,and the sample coverage was above 99.71%.The alpha-diversity indexes of Simpson,Shannon,Chao1,Observed species and Pielou_e were 0.99,9.96,32,418.0,32,206.5 and 0.86,respectively.Actinomycetota was the most dominant phylum in all samples and was significantly enriched in the rhizosphere of two-year-old A.argyi.The dominant phyla also included Pseudomonadota and Bacillota;the dominant orders were Micrococcales and Rhizobiales,and the dominant genera were Rhizobium,Lysobacte and Bacillus.Principal component analysis showed significant differences between rhizosphere and non-rhizosphere microbial communities,and A.argyi planting significantly improved the diversity and evenness of soil microbial community.Functional prediction indicated that the abundance of metabolism was the highest in KEGG level 1 pathways,and COG functions were mainly concentrated in membrane transport,translation,DNA replication,signal transduction,amino acid/carbohydrate metabolism and secondary metabolite synthesis.This study provides a theoretical basis for the prevention and control of continuous cropping obstacles and the regulation of rhizosphere microenvironment of A.argyi.

李玉萍

甘肃省农业科学院经济作物与啤酒原料研究所,兰州 730070

农业科技

艾草Illumina高通量测序微生物多样性功能预测

Artemisia argyiIllumina high-throughput sequencingmicrobial diversityfunctional prediction

《农业与技术》 2026 (9)

15-21,7

甘肃省科技计划项目(项目编号:25CXNA009)

10.19754/j.nyyjs.20260930003

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