黑麦NPC基因家族鉴定及苗期胁迫表达分析OA
Identification of NPC Gene Family and Expression Analysis of Seedling Stress in Rye(Secale cereale L.)
非特异性磷脂酶C(NPC)是植物磷脂代谢的重要酶类,能够催化磷脂水解生成甘油二酯和磷酸化头部基团,从而参与脂质信号转导、膜结构重塑及逆境胁迫响应,在植物生长发育过程中发挥关键作用.ScNPCs是黑麦(Secale cereale L.)基因组中编码NPC蛋白的一类基因家族.为系统解析黑麦ScNPCs基因家族的功能特性,采用生物信息学方法对ScNPCs家族成员的理化性质、系统发育关系、保守基序与结构域特征以及启动子顺式作用元件进行了综合分析,并比较了其在不同组织、发育阶段及干旱和低温胁迫条件下的表达模式.结果表明,6个ScNPCs家族基因(ScNPC01~ScNPC06)分布于黑麦5条染色体上,编码蛋白长度为509~541个氨基酸,其启动子区域富集激素响应、胁迫应答及发育调控相关顺式元件.转录组数据分析显示,ScNPCs在黑麦生长发育过程中呈现明显的时空特异性表达特征,在授粉后籽粒形成阶段,ScNPCs成员均呈现不同程度的表达上调趋势.实时荧光定量PCR(qRT-PCR)分析表明,干旱胁迫下ScNPC01~ScNPC06均可被诱导表达;而低温胁迫下ScNPC04在胁迫中期显著上调,ScNPC02和ScNPC03表达则呈现先升高后降低的动态响应趋势.本研究为黑麦NPC基因家族在逆境适应中的功能研究提供了候选基因资源和理论依据.
Non-specific phospholipase C(NPC)is an important class of enzymes involved in plant phospholipid metabolism.It catalyzes the hydrolysis of phospholipids to generate diacylglycerol and phosphorylated head groups,thereby playing a crucial role in lipid signal transduction,membrane remodeling,and responses to abiotic stresses during plant growth and development.ScNPCs represent a group of genes family encoding NPC proteins in the genome of rye(Secale cereale L.).Comprehensive bioinformatics analyses were performed to evaluate their physicochemical properties,phylogenetic relationships,conserved motifs and domain structures,as well as cis-acting elements in promoter regions.In addition,their expression patterns were analyzed across different tissues,developmental stages,and under drought and low-temperature stress conditions.Results showed that six ScNPCs genes(ScNPC01-ScNPC06)are distributed across five rye chromosomes,encoding proteins ranging from 509-541 amino acids in length.Their promoter regions are enriched with cis-acting elements related to phytohormone signaling,stress responses,and developmental regulation.Transcriptomic analysis revealed that ScNPCs expressions exhibit pronounced spatiotemporal specificity,with all members being upregulated during post-pollination grain filling stage.Quantitative real-time PCR(qRT-PCR)further revealed that drought stress significantly induces the expression of ScNPC01-ScNPC06,whereas low-temperature stress selectively upregulates ScNPC04 at the middle phase of the treatment,while ScNPC02 and ScNPC03 show a transient rise followed by a subsequent decline.This study provides valuable candidate genes and a theoretical foundation for further functional studies on the NPC gene family in Secale cereale L.in response to diverse stress conditions.
王晓东;豆飞飞;刘春颖;王石磊;刘彩霞;刘凤楼;王掌军;李清峰
宁夏大学农学院/宁夏优势特色现代分子育种重点实验室,宁夏银川 750021宁夏大学农学院/宁夏优势特色现代分子育种重点实验室,宁夏银川 750021宁夏大学农学院/宁夏优势特色现代分子育种重点实验室,宁夏银川 750021宁夏大学农学院/宁夏优势特色现代分子育种重点实验室,宁夏银川 750021宁夏大学农学院/宁夏优势特色现代分子育种重点实验室,宁夏银川 750021宁夏大学农学院/宁夏优势特色现代分子育种重点实验室,宁夏银川 750021宁夏大学农学院/宁夏优势特色现代分子育种重点实验室,宁夏银川 750021宁夏大学农学院/宁夏优势特色现代分子育种重点实验室,宁夏银川 750021
农业科技
黑麦NPC家族全基因组鉴定非生物胁迫表达分析
Secale cereale L.NPC familygenome-wide identificationabiotic stressexpression analysis
《核农学报》 2026 (10)
1918-1928,11
国家自然科学基金项目(32260467),宁夏回族自治区自然科学基金优秀青年项目(2024AAC05022),农业农村部-农业种质资源普查收集、保护鉴定服务(19240579),宁夏科技重大专项(2022BSB03109)
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