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花苜蓿CIPK基因家族鉴定及干旱胁迫下的表达分析OA

Genome-wide identification and expression analysis of the CIPK gene family in Medicago ruthenica under drought stress

中文摘要英文摘要

CIPK(calcineurin B-like proteins interacting protein kinase)是一种与钙离子信号响应元件结合的蛋白,在植物响应非生物胁迫过程中发挥重要作用.本试验通过本地同源比对和隐马尔可夫模型搜索在花苜蓿(Medicago ruthenica)基因组中鉴定到 25 个 CIPK 基因家族成员,并分为 4 个亚家族(Group Ⅰ~Group Ⅳ).除 MrCIPK24 和 MrCIPK25 未组装在染色体上,其余成员分布在 7 条染色体上;基因结构和保守结构域分析表明,该家族成员可分为内含子富集和内含子缺失两个类型,多数 Motif 高度保守;干旱胁迫下的表达模式分析和实时荧光定量 PCR 结果表明,多数 MrCIPK基因的表达受到干旱胁迫影响,其中 MrCIPK02 基因可能对花苜蓿响应干旱胁迫有正向调节作用.本试验将为后续花苜蓿 CIPK 基因家族成员的功能研究提供理论支撑.

CIPK(calcineurin B-like interacting protein kinase)is a protein that binds to calcium-ion signal response elements and plays a significant role in plant responses to abiotic stress.In this study,25 CIPK gene family members were identified in the Medicago ruthenica genome through local homology alignment and hidden Markov model searches and were divided into four subfamilies(Group Ⅰ-Group Ⅳ).The remaining members were distributed across seven chromosomes,except for MrCIPK24 and MrCIPK25,which were not assembled on chromosomes.Gene structure and conserved domain analyses indicated that the family members could be divided into two types,intron-rich and intron-lacking,with the majority of the motifs being highly conserved.Expression pattern analysis under drought stress and real-time fluorescent quantitative PCR results showed that expression of the majority of the MrCIPK genes was affected by drought stress,among which the MrCIPK02 gene may have a positive regulatory effect on M.ruthenica's response to drought stress.This study provides theoretical support for subsequent functional studies of the CIPK gene family members in M.ruthenica.

章磊;严伟;罗栋;王召明;刘志鹏;周强

草种创新与草地农业生态系统全国重点实验室/兰州大学草地农业科技学院,甘肃 兰州 730020草种创新与草地农业生态系统全国重点实验室/兰州大学草地农业科技学院,甘肃 兰州 730020广西大学动物科学技术学院,广西 南宁 530004国家草业技术创新中心,内蒙古 呼和浩特 010051草种创新与草地农业生态系统全国重点实验室/兰州大学草地农业科技学院,甘肃 兰州 730020草种创新与草地农业生态系统全国重点实验室/兰州大学草地农业科技学院,甘肃 兰州 730020

全基因组鉴定CIPK蛋白激酶钙信号通路表达模式分析抗旱分子机制实时荧光定量PCR植物抗逆性

genome-wide identificationCIPK protein kinasecalcium signaling pathwayexpression pattern analysismolecular mechanism of drought resistancequantitative real-time PCRplant stress tolerance

《草业科学》 2026 (8)

1999-2013,15

内蒙古自治区"揭榜挂帅"项目(2022JBGS0040)2023年国家草业技术创新中心(筹)重大创新平台建设专项(CCPTZX2023N04)甘肃省科技重大专项(23ZDNA009)

10.11829/j.issn.1001-0629.2024-0808

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