联合分析揭示成熟芝麻蒴果在闭蒴/裂蒴过程中脂类代谢和转运蛋白调控机制OA
Integrated analysis reveals lipid metabolism and transporter regulation mechanisms during closure/cracking process of mature sesame capsules
[目的]从分子和代谢水平解析影响成熟期芝麻蒴果闭合/裂开性状背后的调控网络,为芝麻品种闭蒴性状的选育提供新的线索和研究方向.[方法]本团队前期研究提出木质素可能是影响芝麻蒴果闭合的重要代谢物,木质素作为细胞壁的核心骨架,从物理化学层面奠定表型的'硬件'基础,而硬件的功能发挥必须依赖'软件'的调度,因此此次对同批数据进行再次挖掘并转换研究维度,基于转录测序和代谢物广靶检测,通过分类、富集和联合分析等手段对数据进行挖掘研究.[结果]GO显示,DEGs既显著富集在膜转运和微管运动等条目上,又显著富集在磷酸酶活性和ATP酶活性等条目上.KEGG显示,DEGs在ABC转运蛋白通路上富集,且通路上DEGs全部包含在GO-磷酸酶活性和ATP酶活性相关条目中;DAMs在磷脂酰肌醇信号系统通路和肌醇磷酸代谢通路富集,两条通路共同且唯一的DAMs(肌醇1,4-二磷酸)经过简单的酶促反应生成化合物肌醇,也参与到ABC转运蛋白代谢途径.DEGs和DAMs共同富集在脂肪酸分解途径,脂肪酸代谢是细胞能量代谢(ATP)的关键过程.其他脂类代谢通路也存在富集情况.此外,根据GO富集结果以及DEGs所归属的转录因子家族推断出,Kinesin驱动蛋白也活跃参与该生理过程.[结论]本研究推测在芝麻闭蒴和裂蒴过程中,脂类代谢产生ATP与ABC或Kinesin等转运蛋白结合,推动底物在细胞膜内外转运或微管内的运输,为进一步探索影响成熟期芝麻蒴果闭合的分子机制带来新的启发和方向.
[Objective]The paper aimed to dissect the regulatory network underlying the traits of mature sesame pod closure or splitting at the molecular and metabolic levels,providing new clues and exploration directions for the breeding of sesame varieties with pod closure traits.[Method]Our previous research suggested that lignin might be an important metabolite affecting the closure of sesame capsules.As the core framework of the cell wall,lignin laid the'hardware'foundation for the phenotype from the physical and chemical perspective.However,the functioning of the hardware must rely on the'software'control.Therefore,this time we re-examined the same batch of data and shifted the research dimension.Based on transcriptome sequencing and broad-target metabolite detection,we conducted data mining and research through classification,enrichment,and combined analysis.[Result]GO showed that DEGs were significantly enriched not only in items such as mem-brane transport and microtubule motility,but also in items such as phosphatase activity and ATPase activity.KEGG analysis revealed that the DEGs were enriched in the ABC transporter pathway.The main function of this protein was to utilize the energy generated from ATP hydroly-sis to transport substrates across the membrane in an anti-concentration gradient manner.Moreover,all the DEGs in this pathway were includ-ed in the above-mentioned GO-phosphatase activity and ATPase activity-related entries.DAMs were enriched in the phosphatidylinositol sig-naling system pathway and the inositol phosphate metabolism pathway.The only DAMs shared by both pathways-inositol 1,4-bisphosphate-underwent a simple enzymatic reaction to produce the compound inositol,and it was also involved in the ABC transporter metabolism path-way.DEGs and DAMs were jointly enriched in the fatty acid breakdown pathway,and fatty acid metabolism was a key process in cellular en-ergy metabolism(ATP).Other lipid metabolic pathways also showed enrichment.Furthermore,based on the results of GO enrichment in mul-tiple microtubule-related entries,and by inferring from the transcription factor families to which the DEGs in the entries belong,it could be concluded that the Kinesin-driven protein was also actively involved in the closure and dehiscence of sesame capsules.[Conclusion]Based on the research results,we speculate that during the process of sesame seed capsule closure and rupture,lipid metabolism generates ATP which combines with transport proteins such as ABC or Kinesin,providing energy to facilitate the transport of substrates across the cell mem-brane or within microtubules,thus offering new inspiration and direction for further exploration of the molecular mechanism underlying the closure of sesame capsule at the mature stage.
陈瑞瑞;蔡群兴
安徽省科技成果转化促进中心/安徽省科学技术研究院,合肥 230031安徽省科技成果转化促进中心/安徽省科学技术研究院,合肥 230031
农业科技
芝麻蒴果转录组代谢组富集通路脂类代谢ATP转运蛋白
Sesame capsuleTranscriptomeMetabolomeEnriched pathwaysLipid metabolismATPTransport protein
《西南农业学报》 2026 (6)
1322-1331,10
安徽省科技厅直属单位科技服务能力建设专项(202506a04020005)
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