首页|期刊导航|西南农业学报|圆齿野鸦椿WRKY基因家族鉴定及在花果发育中的表达分析

圆齿野鸦椿WRKY基因家族鉴定及在花果发育中的表达分析OA

Identification and expression analysis of WRKY gene family in Euscaphis konishii Hayata

中文摘要英文摘要

[目的]进一步阐明WRKY基因家族在圆齿野鸦椿(Euscaphis konishii Hayata)花果发育的调控机制和分子机理.[方法]基于物种全基因组测序数据,系统鉴定出WRKY转录因子基因家族的所有成员,并对其理化性质、保守基序、基因结构、系统发育关系、染色体分布、顺式作用元件等关键生物学指标开展全面分析.[结果]鉴定出81个圆齿野鸦椿WRKY基因,非均匀分布于12条染色体,依系统发育树可划分为Group Ⅰ、Group Ⅱ、Group Ⅲ 3个主要组别.理化性质分析显示,氨基酸数量为120~764个;疏水性均为负数,证实所有EkWRKY蛋白均为亲水性蛋白,81个EkWRKY蛋白均定位于细胞核.启动子顺式作用元件预测发现,EkWRKY基因启动子区域含大量与植物生长发育调控、激素信号响应及逆境胁迫耐受相关的元件,黄酮类化合物生物合成途径相关特异性元件.花果特异性表达分析显示,EkWRKY14、EkWRKY09及EkWRKY38在花瓣和雄蕊中高表达,推测参与开花过程调控;EkWRKY79、EkWRKY29、EkWRKY09、EkWRKY38及EkWRKY37表达量随果实发育呈高-低-高的趋势,并在果实脱落期达峰值,其表达模式与圆齿野鸦椿果实成熟变红、开裂后挂果超130 d且不脱落的独特表型一致.[结论]本研究系统解析了EkWRKY基因在圆齿野鸦椿花、果组织中的表达特征,明确了该基因的组织表达模式,为后续阐明圆齿野鸦椿的花、果发育特异性,以及进一步发掘其潜在药用价值提供了重要理论依据.

[Objective]The paper aimed to further elucidate the regulatory mechanisms and molecular mechanisms of the WRKY gene family in the floral and fruit development of Euscaphis konishii Hayata.[Method]Based on whole-genome sequencing data of the species,the study systematically identified all members of the WRKY transcription factor gene family and conducted a comprehensive analysis of key biological indicators,including their physicochemical properties,conserved motifs,gene structure,phylogenetic relationships,chromosomal distribution and cis-acting elements.[Result]A total of 81 E.konishii WRKY genes were identified,distributed unevenly across 12 chromosomes.Based on the phylogenetic tree,they could be classified into three main groups:Group Ⅰ,Group Ⅱ and Group Ⅲ.Analysis of physicochemical proper-ties revealed that the amino acid count ranged from 120 to 764;hydrophobicity scores were all negative,confirming that all EkWRKY proteins were hydrophilic,and all 81 EkWRKY proteins were localized in the cell nucleus.Prediction of promoter cis-acting elements revealed that the promoter regions of EkWRKY genes contained a large number of elements associated with the regulation of plant growth and development,hor-mone signalling responses,and tolerance to abiotic stress,as well as specific elements related to the flavonoid biosynthesis pathway.Analysis of flower and fruit-specific expression showed that EkWRKY14,EkWRKY09 and EkWRKY38 were highly expressed in petals and stamens,sug-gesting their involvement in the regulation of the flowering process;EkWRKY79,EkWRKY29,EkWRKY09,EkWRKY38 and EkWRKY37 exhib-ited a high-low-high expression trend during fruit development,peaking during the fruit abscission stage.This expression pattern was consist-ent with the unique phenotype of E.konishii,characterized by fruit reddening and maturation,followed by fruit retention for over 130 days af-ter dehiscence without abscission.[Conclusion]The study systematically analyzes the expression characteristics of the EkWRKY gene in the floral and fruit tissues of E.konishii,clarifying the tissue-specific expression patterns of this gene.It provides an important theoretical basis for elucidating the specific characteristics of floral and fruit development in E.konishii and for further exploring its potential medicinal value.

陈烜;吴建凯;张梓扬;欧泽慧;李娟;邹双全

福建农林大学林学院,福州 350002||自然生物资源保育利用福建省高校工程研究中心,福州 350002福建省林业信息中心,福州 350002福建农林大学林学院,福州 350002||自然生物资源保育利用福建省高校工程研究中心,福州 350002福建农林大学林学院,福州 350002||自然生物资源保育利用福建省高校工程研究中心,福州 350002福建农林大学林学院,福州 350002||自然生物资源保育利用福建省高校工程研究中心,福州 350002福建农林大学林学院,福州 350002||自然生物资源保育利用福建省高校工程研究中心,福州 350002

农业科技

WRKY基因家族圆齿野鸦椿生物信息学系统进化分析

WRKY gene familyEuscaphis konishii HayataBioinformaticsPhylogenetic analysis

《西南农业学报》 2026 (6)

1285-1296,12

中央财政林业科技推广资金项目(闽[2025]TG04号)福建省科技厅引导性项目(2022Y0043)

10.16213/j.cnki.scjas.2026.6.011

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