香蕉枯萎菌侵染香蕉抗/感品种的差异表达lncRNAs及其功能初步研究OA
Preliminary Study on Differentially Expressed LncRNAs and Their Functions in Fusarium oxysporum f.sp.cubense Tropical Race 4 Reisolated from Resistant and Susceptible Banana Cultivars
对尖孢镰刀菌古巴专化型热带 4 号生理小种(Foc TR4)侵染抗/感香蕉品种重分菌高丰度差异表达长链非编码RNA(DElncRNAs)进行功能分析,旨在解析 DElncRNAs 在参与香蕉枯萎菌生长发育、致病性等关键生物学过程的相关调控功能.以感染抗/感香蕉重分菌 Foc TR4 进行 RNA-seq 测序并筛选获得 DElncRNAs,结合 qRT-PCR 对 DElncRNAs及对应预测靶标基因进行差异表达关联分析,利用 Split-marker 方法对 DElncRNAs 进行基因敲除,并对 ΔlncRNAs 敲除突变体进行菌落直径、产孢量及致病力等测定分析.研究结果显示,从感染抗/感香蕉重分菌中测序获得626个 DElncRNAs以及9 904个顺式靶标基因,筛选出MSTRG.1558.1、MSTRG.9709.3等7个高丰度DElncRNAs.7 个DElncRNAs 与 13 个预测靶标基因存在差异表达正/负相关性.ΔlncRNA_1558.1 敲除突变体生长缓慢且菌落背面粉色、分生孢子形态发生改变且产孢量减少.ΔlncRNA_1558.1 等 7 个敲除突变体对不同逆境胁迫响应存在差异.ΔlncRNA_1558.1 等 6 个敲除突变体致病力均减弱,而 ΔlncRNA_22894.1 则致病力增强.研究结果表明,lncRNA_1558.1 等 7 个 DElncRNAs 参与调控香蕉枯萎菌FocTR4生长发育、逆境胁迫响应及致病过程,可为解析香蕉枯萎菌致病机制及培育抗病香蕉品种提供新靶点.
This study analyzed the functions of high-abundance differentially expressed long noncoding RNAs(DElncRNAs)in Foc TR4 reisolates from resistant and susceptible banana cultivars,aiming to explore the regulatory roles of DElncRNAs in critical biological processes,including fungal growth,development,and pathogenicity.RNA-seq and lncRNA identification were performed on reisolated Foc TR4 strains,and high-abundance DElncRNAs were screened.qRT‒PCR was adopted to analyze the expression correlation between DElncRNAs and their predicted target genes.The split-marker technique was ap-plied to knock out target DElncRNA genes.Subsequently,the colony diameter,spore yield,and pathogenicity of ΔlncRNA knockout mutants were determined and analyzed.The results revealed that 626 DElncRNAs and 9 904 cis-target genes were identified via transcriptome sequencing.Seven high-abundance DElncRNAs,MSTRG.1558.1 and MSTRG.9709.3,were ob-tained.These seven DElncRNAs presented positive or negative expression correlations with thirteen predicted target genes.The ΔlncRNA_1558.1 mutant showed slow growth,pink colony reversal,altered conidial morphology,and decreased spore production.The seven knockout mutants exhibited distinct responses to diverse stress conditions.Six mutants represented attenuated pathogenicity,whereas ΔlncRNA_22894.1 displayed enhanced pathogenicity.It is concluded that the seven DElncRNAs represented by lncRNA_1558.1 participate in modulating the growth,stress response and pathogenic processes of Foc TR4.The findings offer novel targets for clarifying the pathogenic mechanism of the banana Fusarium wilt fungus and breeding disease-resistant banana cultivars.
曾凡云;王艳玮;彭军
中国热带农业科学院环境与植物保护研究所/农业农村部热带作物有害生物综合治理重点实验室/海南省热带农业有害生物监测与控制重点实验室 海南 海口 571101中国热带农业科学院环境与植物保护研究所/农业农村部热带作物有害生物综合治理重点实验室/海南省热带农业有害生物监测与控制重点实验室 海南 海口 571101中国热带农业科学院环境与植物保护研究所/农业农村部热带作物有害生物综合治理重点实验室/海南省热带农业有害生物监测与控制重点实验室 海南 海口 571101||中国热带农业科学院三亚研究院/热带作物生物育种全国重点实验室 海南 三亚 572024
农业科技
香蕉枯萎菌热区4号生理小种长链非编码RNA植物—病原菌互作致病力产孢量
Fusarium oxysporum f.sp.cubense Tropical Race 4(Foc TR4)long noncoding RNAplant‒pathogen interactionpathogenicityspore yield
《热带农业科学》 2026 (7)
61-73,13
海南省自然科学基金高层次人才项目(No.321RC1089)海南省自然科学基金面上项目(No.324MS106)国家现代农业产业技术体系(No.CARS-31).
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