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藜麦CqZIP基因家族鉴定与锌铁缺乏时表达模式分析OA

Identification of CqZIP Gene Family and Analysis of Its Expression Patterns under Zinc/Iron Deficiency in Chenopodium quinoa

中文摘要英文摘要

锌铁转运蛋白(ZIP)作为广泛分布于植物体内的金属离子转运蛋白,在锌铁离子的吸收和运输过程中发挥关键作用.本研究基于藜麦基因组数据库,利用生物信息学方法对藜麦CqZIP基因家族进行鉴定及特征分析,并采用实时荧光定量PCR分析CqZIP基因在缺铁或缺锌处理后的表达模式.结果表明,藜麦CqZIP基因家族有28个成员,分别命名为CqZIP1~CqZIP28,被划分为4个亚家族,不均匀地分布在藜麦的13条染色体上,编码蛋白长度为175~863,分子质量为18 847.87~94 600.79 u,等电点为4.84~9.25.有24个CqZIP蛋白定位于细胞质膜.除CqZIP26外,CqZIPs均有跨膜结构域.藜麦不同组织的转录组结果表明,CqZIPs基因表达具有组织特异性,CqZIP9在根部表达量最高,CqZIP22在茎叶中的表达较强.缺锌诱导后的藜麦根部转录组数据表明,缺锌处理下,有9个CqZIP基因表达上调,有4个CqZIP基因表达下调.qRT-PCR结果显示,在缺锌后恢复培养下,根、茎、叶中CqZIP5、CqZIP9、CqZIP12较对照表达上调,推测这3个基因可能参与Zn2+的吸收、长距离运输和再分配.

Zinc-iron transporter(ZIP)proteins are widely distributed metal ion transporters in plants and play crucial roles in the uptake and transport of zinc and iron ions.In this study,based on the qui-noa genome database,we used bioinformatics methods to identify and analyze the characteristics of the CqZIP gene family and also explored the expression patterns of CqZIP genes under iron or zinc defi-ciency conditions using real-time quantitative PCR(qRT-PCR).The results revealed that the quinoa CqZIP gene family contains 28 members,named CqZIP1-CqZIP28,which are divided into 4 subfami-lies and are unevenly distributed across 13 chromosomes of quinoa.The encoded proteins range from 175 to 863 amino acids in length,with molecular mass of 18 847.87 to 94 600.79 u and isoelectric points(pI)of 4.84 to 9.25.Among the 28 CqZIPs,24 CqZIP proteins are localized in the plasma mem-brane.Most CqZIPs contain transmembrane domains except for CqZIP26.Transcriptome analysis of different tissues in quinoa showed that CqZIP expression was tissue-specific.CqZIP9 exhibited the highest expression level in roots,while CqZIP22 showed higher expression levels in stems and leaves.Transcriptome data from roots under zinc deficiency conditions showed the expression levels of 9 CqZ-IP genes was upregulated and that of 4 CqZIP genes was downregulated.qRT-PCR results showed that during recovery from zinc deficiency,compared with the control,the expression levels of CqZIP5,CqZIP9,and CqZIP12 was up-regulated in roots,stems and leaves.These results suggest that these three genes may be involved in the uptake,long-distance transport and redistribution of Zn2+.

许茹玲;陈晓婷;梁亚茹;曹佳玲;杨利艳

山西师范大学生命科学学院,太原 030000山西师范大学生命科学学院,太原 030000山西师范大学生命科学学院,太原 030000山西师范大学生命科学学院,太原 030000山西师范大学生命科学学院,太原 030000

藜麦ZIP基因家族生物信息学缺铁缺锌

Chenopdium quinoaZIP gene familyBioinformaticsIron deficiencyZinc deficiency

《西北农业学报》 2026 (8)

1415-1426,12

山西省自然科学基金(202203021221122). Natural Science Foundation of Shanxi Province(No.202203021221122).

10.7606/j.issn.1004-1389.2026.08.003

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