基于Deeplabv3+算法的皮肤癣菌菌种分类模型构建与性能验证OA
Construction and performance validation of a dermatophyte species classification model based on the Deeplabv3+algorithm
本研究构建基于 Deeplabv3+算法的人工智能(AI)模型,旨在实现临床常见皮肤癣菌菌种的快速精准分类,提升传统诊断效率.选取 74 株临床常见皮肤癣菌(包括红色毛癣菌、须癣毛癣菌、犬小孢子菌、絮状表皮癣菌),经内转录间隔区(ITS)测序验证菌种准确性后,培养并采集乳酸酚棉兰染色图像962张,按3:1比例分配为训练集(839张)与测试集(123张),用于模型构建与性能验证,并与临床技师人眼识别结果进行对比.AI 模型对 4 种皮肤癣菌的总体准确率为 71.54%,各类别召回率分别为犬小孢子菌80.00%、絮状表皮癣菌79.07%、须癣毛癣菌65.00%、红色毛癣菌53.33%;临床技师人眼识别的总体准确率为 72.36%,AI 识别和人眼识别结果一致性检验提示两种方法一致性程度较强(Kappa=0.769,P<0.01);亚组分析显示红色毛癣菌、须癣毛癣菌 Kappa 值分别为 0.875和 0.808,提示一致性极强,而絮状表皮癣菌和犬小孢子菌 Kappa值分别为 0.677和 0.534.两组总体准确率差异无统计学意义(χ2=0.33,P>0.05),但AI模型对须癣毛癣菌的识别召回率显著高于人眼(P<0.05),对絮状表皮癣菌的识别召回率显著低于人眼(P<0.05).在识别速度方面,AI 平均识别速度为(2.46±0.04)s/张,显著快于人眼的(3.75±0.61)s/张(P<0.05),且可批量连续处理图像(962 张总耗时约 40 min),无性能衰减,而人眼受视觉疲劳限制需间断休息,处理同等图像总耗时约 290 min.本研究首次构建皮肤癣菌 AI 分类模型,填补了该领域研究空白,其识别准确率与临床技师相当且一致性较强,同时具备更快识别速度、稳定批量处理能力及不受时空限制的优势,可为基层医院及临床快速诊疗提供新工具,具有良好推广应用前景.
An artificial intelligence(AI)model based on the Deeplabv3+algorithm was constructed to achieve rapid and accurate classification of clinically common dermatophyte species and enhance the efficiency of traditional diagnosis.In total,74 clinically common dermatophyte strains(including Trichophyton rubrum,T.mentagrophytes,Microsporum canis,and Epidermophyton floccosum)were selected.After verifying the accuracy of the strains by internal transcribed spacer(ITS)sequencing,lactophenol cotton blue staining images were acquired from cultured strains,yielding 962 images.These images were divided into a training set(839 images)and a test set(123 images)for model construction and performance verification,and the results were compared with those of routine visual identification by clinical technicians.The AI model achieved an overall accuracy of 71.54%for the four dermatophyte species,with the per-class recall values being 80.00%for M.canis,79.07%for E.floccosum,65.00%for T.mentagrophytes,and 53.33%for T.rubrum.The overall accuracy of routine visual identification by clinical technologists was 72.36%.Consistency analysis revealed a substantial agreement between the AI model and visual identification(Kappa=0.769,P<0.01).Subgroup analysis showed almost perfect agreement for T.rubrum(Kappa=0.875)and T.mentagrophytes(Kappa=0.808),while the Kappa values for E.floccosum and M.canis were 0.677 and 0.534,respectively.No statistically significant difference was observed in the overall accuracy between the two methods(χ2=0.33,P>0.05).AI model exhibited a significantly higher recall for T.mentagrophytes than visual identification(P<0.05),whereas its identification performance for E.floccosum was significantly lower(P<0.05).In terms of recognition speed,the average speed of the AI model was(2.46±0.04)seconds per image,significantly faster than that of visual identification(3.75±0.61)seconds per image,P<0.05.The AI model could process images in batches continuously(approximately 40 minutes for disposing 962 images)without performance degradation,while visual identification was limited by visual fatigue and required intermittent rest,taking approximately 290 minutes for disposing the same number of images.This is the first construction of an AI classification model for dermatophytes,filling the research gap in this field.The model demonstrated comparable identification accuracy substantially consistent with visual identification of clinical technologists,offering the advantages of faster processing speed,stable batch processing capability,and without restriction of time and location.It can serve as a novel tool for rapid clinical diagnosis,especially in primary medical institutions,and thus holds promising prospects for clinical application and popularization.
尚梦雅;方文捷;廖万清;杨利华;陈天成;潘炜华
海军军医大学第二附属医院皮肤科 上海市医学真菌分子生物学重点实验室,上海 200003海军军医大学第二附属医院皮肤科 上海市医学真菌分子生物学重点实验室,上海 200003海军军医大学第二附属医院皮肤科 上海市医学真菌分子生物学重点实验室,上海 200003东部战区海军医院急诊科,浙江 舟山 316000海军军医大学第二附属医院皮肤科 上海市医学真菌分子生物学重点实验室,上海 200003海军军医大学第二附属医院皮肤科 上海市医学真菌分子生物学重点实验室,上海 200003
皮肤癣菌Deeplabv3+人工智能真菌
dermatophyteDeeplabv3+artificial intelligencefungi
《菌物学报》 2026 (8)
68-76,9
国家自然科学基金(82472304)上海领军人才项目(LJRC-PWH)国家重点研发计划(2022YFC2504803)This work was supported by the National Natural Science Foundation of China(82472304),the Shanghai Leading Talent Program(LJRC-PWH),and the National Key Research and Development Program of China(2022YFC2504803).
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