散囊菌目新科、新属和新种——基于全基因组测序技术的9基因系统发育分析OA
New families,genus and species in Eurotiales inferred from nine-gene phylogeny with the aid of whole genome sequencing
散囊菌目 Eurotiales 物种具有重要的工业、农业、生态和医药价值.本研究从我国广东省分离得到一株该目真菌 XCW_SN069,为了确定其准确的分类地位,利用高通量测序技术测定了其全基因组序列.又从公共数据库获取了该目大团囊菌科 Elaphomycetaceae 2 个基因组和爪甲团囊菌目Onygenales 2个基因组用以比较分析.从这些基因组中,提取了9个基因片段,包括核糖体DNA转录间隔区(ITS)、大亚基(28S)、小亚基(18S)、RNA 聚合酶Ⅱ第二大亚基(RPB2)、第一大亚基(RPB1)、TCP-1 伴侣蛋白复合体第 8 亚基(Cct8)、推定核糖体生物合成蛋白(Tsr1)、β 微管蛋白(BenA)和钙调蛋白(CaM).结合基因组提取数据与已发表研究数据,我们构建了散囊菌目 9 基因单独或联合数据组,涵盖了该目已知的全部 5 科 27 属.经过系统发育分析发现,菌株 XCW_SN069代表了该目一个未描述的新种——中国南方菌Austromyces sinicus、新属——南方菌属Austromyces和新科——南方菌科 Austromycetaceae,其在 9 基因联合系统发育树上与大团囊菌科关系最近.同时,研究还发现,嗜热子囊菌科Thermoascaceae的原有概念没有获得本研究支持,而原隶属于该科的拟青霉属Paecilomyces应独立成为一个新科——拟青霉科 Paecilomycetaceae.因此,散囊菌目的分类系统被修订为包含7个科,即曲霉科Aspergillaceae、南方菌科、大团囊菌科、拟青霉科、异青霉科Penicillaginaceae、嗜热子囊菌科和发菌科Trichocomaceae.本文提供了中国南方菌的详细描述与图示,并对散囊菌目中的高阶分类单元进行了评述.
Species of Eurotiales are of great industrial,agricultural,ecological and medicinal importance.A strain of this order XCW_SN069 was isolated from Guangdong Province of China.In order to determine its phylogenetic position,the whole genome of the strain was sequenced using high-throughput sequencing platform.Two genomes of Elaphomycetaceae and two others of Onygenales were retrieved from GenBank for phylogenetic comparison.Nine gene partitions were extracted from the genomes or gathered from the public databases,which include internal transcribed spacer(ITS),large subunit(28S)and small subunit(18S)of the nuclear ribosomal DNA,RNA polymerase Ⅱ second largest subunit(RPB2),RNA polymerase Ⅱ largest subunit(RPB1),theta subunit of the TCP-1 chaperonin complex(Cct8),a putative ribosome biogenesis protein(Tsr1),β-tubulin(BenA)and calmodulin(CaM).Separate and concatenated datasets were compiled containing all the 27 accepted genera of the five families for reconstruction of the phylogenies of Eurotiales.The strain XCW_SN069 represents a new species(Austromyces sinicus)of a new genus(Austromyces)belonging to a new family(Austromycetaceae)which is sister to the ectomycorrhizal family Elaphomycetaceae in the nine-gene phylogeny.The current concept of Thermoascaceae was not supported by the analysis and needs to be emended,thus another new family,Paecilomycetaceae was proposed to accommodate the genus Paecilomyces.The classification of Eurotiales was therefore updated to include seven families:Aspergillaceae,Austromycetaceae,Elaphomycetaceae,Paecilomycetaceae,Penicillaginaceae,Thermoascaceae and Trichocomaceae.Detailed description and illustration of the new species were given.Taxonomic comments for the new taxa at higher ranks were also provided.
彭璐瑶;庄文颖;王新存
中国科学院微生物研究所 微生物多样性与资源创新利用全国重点实验室,北京 100101||中国科学院大学,北京 100049中国科学院微生物研究所 微生物多样性与资源创新利用全国重点实验室,北京 100101中国科学院微生物研究所 微生物多样性与资源创新利用全国重点实验室,北京 100101
子囊菌门分类系统新分类单元分类学
Ascomycotaclassificationnew taxataxonomy
《菌物学报》 2026 (7)
1-13,13
This work was supported by the National Natural Science Foundation of China(32270008).
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