基于环境DNA的靶向物种特异性检测技术及其在水生生态系统监测中的应用OA
Research advances in targeted species-specific detection using environmental DNA with applications in aquatic ecosystem monitoring
基于环境 DNA(eDNA)技术的靶向物种特异性检测正在逐步取代传统检测方法,成为水生生态系统监测的前沿工具.本文综述了 eDNA 在水生生物单物种特异性检测中的应用进展,重点讨论了线粒体区靶基因(如 COⅠ、Cytb、D-Loop 等)的选择与技术路线,分析了各类检测技术(如 qPCR、ddPCR、LAMP 等)的优势与局限,并提出了结合辅助技术(如 LFA 试纸、抗抑制剂策略、纳米传感器等)的创新路径.尽管 eDNA 技术具有显著优势,但仍面临引物设计、环境干扰、假阳性/阴性等技术挑战.未来的研究将侧重于方法的标准化、基于水动力模型的 eDNA 分布解析,以及三代测序技术的应用,进一步推动 eDNA 技术在水生生态监测和物种保护中的普及应用.
Environmental DNA(eDNA)technology for targeted species-specific detection is rapidly emerging as an innovative tool for aquatic ecosystems monitoring,and it is gradually replacing traditional methods.This review provides a comprehensive assessment of eDNA's application for species-specific detection of aquatic organisms,with a focus on the selection of mitochondrial target genes(e.g.,COⅠ,Cytb,and D-Loop),as well as the associated technical methodologies.It further evaluates the advantages and limitations of various detection techniques,in-cluding quantitative PCR(qPCR),digital PCR(ddPCR),and loop-mediated isothermal amplification(LAMP),and discusses innovative strategies integrating auxiliary technologies such as lateral flow assays(LFA),inhibitor miti-gation strategies,and nanosensors.While eDNA technology offers notable advantages,challenges such as primer design,environmental interference,and false positives and negatives remain.Future research should focus on standardizing methods,using hydrodynamic models to analyze eDNA distribution,and applying third-generation sequencing technologies,thereby advancing the use of eDNA for aquatic ecosystem monitoring and species con-servation.
王玟心;薛东秀;李渊;刘进贤
中国科学院海洋研究所 海洋生态与环境科学重点实验室,山东 青岛 266071||中国科学院大学,北京 100049中国科学院海洋研究所 海洋生态与环境科学重点实验室,山东 青岛 266071自然资源部第三海洋研究所,福建 厦门 361005中国科学院海洋研究所 海洋生态与环境科学重点实验室,山东 青岛 266071
生物科学
水生生态系统eDNA物种特异性检测引物选择策略检测技术
aquatic ecosystemsenvironmental DNA(eDNA)species-specific detectionprimer selection strategydetection technologies
《海洋科学》 2026 (2)
73-90,18
国家重点研究计划课题(2023YFC3108001)国家重点研究计划课题(2024YFF1306804)[National Key Research and Development Program of China,No.2023YFC3108001National Key Research and Development Program of China,No.2024YFF1306804]
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