向日葵 Trihelix 转录因子家族鉴定及表达分析OA
Identification and Expression Analysis of Trihelix Transcription Factor Family in Sunflower
Trihelix基因家族在植物生长发育和逆境胁迫响应中具有重要作用,但目前缺乏针对向日葵(Helianthus annuus L.)trihelix 家族在全基因组水平的系统鉴定与表达特征研究.通过生物信息学方法,对向日葵trihelix 基因家族进行全基因组鉴定,并对其染色体定位、基因复制、系统进化、基因结构、保守基序和胁迫条件下的表达模式进行分析.结果表明,在向日葵基因组中共鉴定到 46个 trihelix家族成员,它们不均匀分布在 15条染色体上.其中有 3对串联复制基因和 6对片段复制基因.系统进化分析分为 5个亚家族,且同一亚家族的家族成员具有相似的基因结构和保守基序.36个向日葵trihelix 基因在根、茎、叶、花和芽中具有表达活性.基于转录组测序(RNA-seq)数据分析,29个 trihelix 基因显著响应向日葵列当寄生胁迫.
Trihelix transcription factors play important roles in plant growth,development,and various stress responses.However,few studies have been conducted on the systematic identification and expression characteristics of trihelix gene family in sunflower(Helianthus annuus L.).In this study,based on bioinformatics methods,the trihelix genes in sunflower genome were identified and characterized,and chromosomal localization,duplication events,phylogenetic analysis,gene structures,conserved motifs and expression patterns under stress conditions were analyzed.The results showed that a total of 46 trihelix genes were identified in the sunflower genome,unevenly distributed across 15 chromosomes.Among them,three pairs of tandemly duplicated genes and six pairs of segmentally duplicated genes were detected.According to phylogenetic analysis,sunflower trihelix family was divided into five subfamilies,and the members of the same subfamily have similar gene structures and conserved motifs.Thirty-six sunflower trihelix genes were expressed in all five organs(root,stem,leaf,flower and bud).Based on transcriptome sequencing(RNA-seq)data,29 trihelix genes significantly responded to Orobanche cumana Wallr.stress.
张曼;李慧英;董海潇;田娟;冯博;于学鹏;王祉诺;张雷;巴桑平措;李雪英
吉林省白城市农业科学院,137000,吉林白城吉林省白城市农业科学院,137000,吉林白城吉林大学植物科学学院,130062,吉林长春吉林省白城市农业科学院,137000,吉林白城吉林省白城市农业科学院,137000,吉林白城吉林省白城市农业科学院,137000,吉林白城吉林省白城市农业科学院,137000,吉林白城吉林省白城市农业科学院,137000,吉林白城吉林省白城市农业科学院,137000,吉林白城吉林省白城市农业科学院,137000,吉林白城
向日葵Trihelix基因家族生物信息学列当表达模式
SunflowerTrihelix gene familyBioinformaticsOrobanche cumana Wallr.Expression pattern
《作物杂志》 2026 (4)
46-56,11
国家特色油料产业技术体系(CARS-14)
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