首页|期刊导航|中药新药与临床药理|基于生物信息学及实验验证探讨宣肺化浊方缓解急性肺损伤的潜在成分及作用机制

基于生物信息学及实验验证探讨宣肺化浊方缓解急性肺损伤的潜在成分及作用机制OA

Potential Active Components and Mechanisms of Xuanfei Huazhuo Prescription in Alleviating Acute Lung Injury:Insights from Bioinformatics Analysis and Experimental Validation

中文摘要英文摘要

目的 利用生物信息学结合细胞实验探讨宣肺化浊方缓解急性肺损伤(ALI)的潜在成分及作用机制.方法 (1)采用超高效液相色谱-飞行时间质谱(UPLC-Triple TOF-MS/MS)表征宣肺化浊方的入血成分,利用Swiss Target Prediction和SEA数据库预测入血成分作用靶点,通过人类在线孟德尔遗传数据库(OMIM)、疗效药靶数据库(TTD)、DrugBank和Genecards数据库检索急性肺损伤靶点,与入血成分靶点取交集后,导入STRING数据库进行蛋白质-蛋白质相互作用(PPI)分析,获得关键靶点,利用Cytoscape建立"中药-成分-靶点"网络,利用NetworkAnalyzer插件分析拓扑信息获得枢纽靶点,利用DAVID数据库进行基因本体(GO)分析及京都基因与基因组百科全书(KEGG)通路富集分析.检索GEO数据库获得急性肺损伤芯片数据,聚焦于"中药-成分-靶点"网络得到的且存在于GEO数据集中的枢纽靶点,通过随机森林模型、最小绝对值收缩和选取算子回归和支持向量机递归特征消除模型分析并筛选核心靶点;利用Schrödinger软件进行分子对接筛选潜在成分.(2)通过脂多糖诱导肺泡上皮细胞建立凋亡模型,并用不同浓度的潜在成分进行干预.CCK-8 法检测细胞增殖情况;流式细胞术检测细胞凋亡情况;免疫印迹法检测细胞中PI3K、p-PI3K、Akt、p-Akt的蛋白表达水平.结果 (1)宣肺化浊方共有 17 个原型成分入血,其改善急性肺损伤的潜在靶点有 118 个;PPI及网络分析提示PIK3CA、AKT1 等是枢纽靶点,主要参与磷酸化修饰、凋亡负调控等生物学过程,介导PI3K/Akt、MAPK、凋亡等信号通路.机器学习发现,AKT1 是宣肺化浊方治疗急性肺损伤的核心靶点;分子对接表明白皮杉醇、白杨素与AKT1的结合性更稳定.(2)白皮杉醇、白杨素的干预能够有效促进脂多糖诱导下MLE-12细胞的增殖,分别选择 0.25、1 μmol·L-1 的白皮杉醇和 24 μmol·L-1 的白杨素进行后续实验.与空白组比较,模型组的凋亡率显著上调(P<0.01),蛋白激酶B(Akt)与磷脂酰肌醇 3-激酶(PI3K)蛋白的磷酸化水平上调(P<0.01).与模型组比较,不同浓度的白皮杉醇和白杨素均可抑制细胞凋亡(P<0.01);此外,白皮杉醇能下调p-Akt/Akt及p-PI3K/PI3K水平(P<0.01),4 μmol·L-1 白杨素可抑制PI3K/Akt通路的磷酸化激活(P<0.01).结论 宣肺化浊方中入血成分白皮杉醇、白杨素,能够有效降低肺泡上皮细胞凋亡水平,展现出良好的改善上皮损伤的作用,其机制或与抑制PI3K/Akt通路磷酸化激活有关.

Objective To explore the potential components and mechanisms of Xuanfei Huazhuo Prescription(XFHZP)in alleviating acute lung injury(ALI)using bioinformatics combined with cellular experiments.Methods(1)The blood-absorbed components of XFHZP were characterized using ultra performance liquid chromatography Triple time of flight mass spectrometry(UPLC-Triple TOF-MS/MS).The targets of these components were predicted using the Swiss Target Prediction and SEA databases.ALI-related targets were retrieved from the Online Mendelian Inheritance in Man(OMIM),Therapeutic Target Database(TTD),DrugBank,and GeneCards databases.Overlapping targets between blood-absorbed components and ALI were subjected to protein-protein interaction(PPI)analysis via the STRING database to identify key targets.A"herb-component-target"network was constructed using Cytoscape,and topological analysis was performed with the NetworkAnalyzer plugin to identify hub targets.Gene Ontology(GO)and Kyoto Encyclopedia of Genes and Genomes(KEGG)pathway enrichment analyses were conducted using the DAVID database.ALI microarray data were obtained from the GEO database.Hub targets that were present in both the network and GEO datasets were further analyzed using random forest model,least absolute shrinkage and selection operator(LASSO)regression,and support vector machine recursive feature elimination(SVM-RFE)to screen core targets.Molecular docking was performed using Schrödinger software to identify potential components.(2)An apoptosis model was established in alveolar epithelial cells(MLE-12)induced by lipopolysaccharide(LPS),and cells were treated with different concentrations of the potential components.Cell proliferation was assessed using the CCK-8 assay;apoptosis was detected by flow cytometry;protein expression levels of PI3K,p-PI3K,Akt,and p-Akt were measured by Western Blot.Results(1)A total of 17 prototype components of XFHZP were absorbed into the blood,and 118 potential targets were identified for ALI treatment.PPI and network analysis indicated that PIK3CA,AKT1,etc.,were hub targets,mainly involved in biological processes such as phosphorylation and negative regulation of apoptosis,and mediated signaling pathways including PI3K/Akt,MAPK,and apoptosis.Machine learning identified AKT1 as the core target of XFHZP in treating ALI.Molecular docking showed that piceatannol and chrysin exhibited more stable binding affinity with AKT1.(2)Piceatannol and chrysin effectively promoted the proliferation of LPS-induced MLE-12 cells.Concentrations of 0.25 and 1 μmol·L-1 for piceatannol,and 24 μmol·L-1 for chrysin were selected for subsequent experiments.Compared with the blank group,the model group showed a significant increase in apoptosis rate(P<0.01)and upregulation of phosphorylation levels of Akt and PI3K(P<0.01).Compared with the model group,both piceatannol and chrysin at different concentrations inhibited apoptosis(P<0.01).Furthermore,piceatannol downregulated the ratios of p-Akt/Akt and p-PI3K/PI3K(P<0.01),and 4 μmol·L-1 chrysin inhibited the phosphorylation activation of the PI3K/Akt pathway(P<0.01).Conclusion The blood-absorbed components piceatannol and chrysin from XFHZP effectively reduce apoptosis of alveolar epithelial cells and exhibit a prominent effect in alleviating epithelial injury,possibly through inhibiting the phosphorylation activation of the PI3K/Akt pathway.

徐倩;刘永琦;靳晓杰;张志明;孙世岱;张慧娟;郝国雄;李经纬;罗向霞;王乐;谈娜娜;刘雪枫

甘肃省中医院(甘肃中医药大学第一附属医院),甘肃 兰州 730050||敦煌医学与转化教育部重点实验室,甘肃 兰州 730000敦煌医学与转化教育部重点实验室,甘肃 兰州 730000敦煌医学与转化教育部重点实验室,甘肃 兰州 730000||甘肃中医药大学 药学院,甘肃 兰州 730000甘肃省中医院(甘肃中医药大学第一附属医院),甘肃 兰州 730050敦煌医学与转化教育部重点实验室,甘肃 兰州 730000||甘肃中医药大学 药学院,甘肃 兰州 730000敦煌医学与转化教育部重点实验室,甘肃 兰州 730000||甘肃中医药大学 药学院,甘肃 兰州 730000敦煌医学与转化教育部重点实验室,甘肃 兰州 730000||甘肃中医药大学 中医临床学院,甘肃 兰州 730000敦煌医学与转化教育部重点实验室,甘肃 兰州 730000||甘肃中医药大学 中医临床学院,甘肃 兰州 730000甘肃省中医院(甘肃中医药大学第一附属医院),甘肃 兰州 730050宝鸡文理学院化学化工学院,陕西 宝鸡 721013宝鸡文理学院化学化工学院,陕西 宝鸡 721013敦煌医学与转化教育部重点实验室,甘肃 兰州 730000||甘肃中医药大学 药学院,甘肃 兰州 730000

医药卫生

宣肺化浊方急性肺损伤生物信息学机器学习超高效液相色谱-飞行时间质谱实验验证MLE-12 细胞磷脂酰肌醇 3-激酶(PI3K)/蛋白激酶B(Akt)

Xuanfei Huazhuo Prescriptionacute lung injurybioinformaticsmachine learningUPLC-Triple TOF-MS/MSexperimental validationMLE-12 cellsphosphoinositide 3-kinase(PI3K)/protein kinase B(Akt)

《中药新药与临床药理》 2026 (6)

1051-1064,14

国家自然科学基金项目(82460925)甘肃省科技厅联合科研基金重大项目(23JRRA1530)甘肃省科技厅科技重大专项-社会发展类项目(22ZD1FA001)国家自然科学基金青年项目(82104682).

10.19378/j.issn.1003-9783.2026.06.008

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