基于机器学习的亚砷酸印迹聚合物功能单体-靶标结合性能预测模型OA
Prediction Model for Binding Performance Between Functional Monomers and Targets in Arsenious Acid-Imprinted Polymers Based on Machine Learning
水体中砷污染问题已引起全球关注,开发其高性能检测材料具有实际意义.然而,传统的实验方法耗时长、资源浪费,而分子模拟虽应用广泛,但其计算量大、处理通量有限,在实际场景中应用受限.本研究利用机器学习算法构建了砷印迹聚合物的功能单体-靶标结合性能预测模型,以指导高性能砷印迹聚合物的高效开发.选择了功能单体与亚砷酸的结构特征与量子化学参数(氢键供体数、重原子数、分子轨道能量等13个参数)为描述符,二者的结合能(ΔE)作为响应变量,采用随机森林、提升决策树和极端梯度提升3种机器学习算法,耦合贝叶斯优化与麻雀搜索算法2种优化算法构建了3种结合性能预测模型.结果显示,采用极端梯度提升模型通过麻雀搜索算法优化获得的预测模型性能最优.该模型的决定系数(R2)在训练集上达0.98672,测试集为0.94938,均方根误差(RMSE)与平均绝对误差(MAE)分别低至0.14304和0.06506,显示出优异的预测精度与稳定性.沙普利累加解释法(SHapley Additive exPlanations,SHAP)特征重要性分析表明,分子总能量与偶极矩对模型预测结果的贡献最为显著.外部验证结果显示,模型预测值与理论值之间的R2为0.71820,表明模型具备一定的泛化能力.本研究为分子印迹聚合物功能单体的理性设计提供了数据驱动的筛选方案与理论指导.
The widespread arsenic contamination in water bodies has become a global concern,driving the need for high-performance detection materials.Traditional experimental methods are often time-consuming and resource-intensive,while molecular simulations are limited by high computational costs and low throughput when handling large candidate libraries.To address this,we developed machine learning models to predict the binding energy(ΔE)between arsenite and molecularly imprinted polymer functional monomers.Using 13 molecular descriptors-including structural and quantum chemical features such as hydrogen bond donor count,heavy atom count,and molecular orbital energies-we trained random forest,least squares boosting,and eXtreme gradient boosting models,optimized via bayesian optimization and sparrow search algorithm.The XGBoost model tuned with sparrow search algorithm performed best,achieving R² values of 0.98672(training)and 0.94938(test),with root mean square error(RMSE)and mean absolute error(MAE)as low as 0.14304 and 0.06506,respectively.Shapley additive exPlanations(SHAP)analysis identified total molecular energy and dipole moment as the most influential features.External validation yielded an R² of 0.71820,confirming the model's generalization capability.This work provides a data-driven strategy for the rational design of functional monomers in arsenite-imprinted polymers.
张静玲;司呈勇;徐斐;吴秀秀
上海理工大学健康科学与工程学院,上海食品快速检测工程技术研究中心,上海 200093上海理工大学中德国际学院,上海 200093上海理工大学健康科学与工程学院,上海食品快速检测工程技术研究中心,上海 200093上海理工大学健康科学与工程学院,上海食品快速检测工程技术研究中心,上海 200093
化学化工
亚砷酸印迹聚合物功能单体机器学习模型结合性能预测沙普利累加解释分析
Arsenious acidImprinted polymer functional monomerMachine learning modelsBinding performance predictionShapley additive exPlanations analysis
《应用化学》 2026 (6)
906-916,11
上海市教育委员会人工智能专项(No.Z-2025-312-023)资助 Supported by the Artificial Intelligence Special Project of Shanghai Municipal Education Commission(No.Z-2025-312-023)
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