首页|期刊导航|口腔疾病防治|单细胞组学解析ACVR1在成牙本质细胞分化中的作用

单细胞组学解析ACVR1在成牙本质细胞分化中的作用OA

Single-cell omics reveals the role of ACVR1 in odontoblastic differentiation

中文摘要英文摘要

目的 基于单细胞测序探究活化蛋白A受体1型(ACVR1)在成牙本质细胞分化及牙本质形成中的影响.方法 利用GEO数据库健康野生型成年小鼠切牙单细胞数据(GSE146123)进行ACVR1与成牙相关转录因子的相关性分析.本实验已获得所在单位的实验动物伦理委员会批准.利用Cre-LoxP系统构建牙源性间充质细胞中ACVR1条件性敲除小鼠(实验组:Osterix-Cre;ACVR1 fx/-,对照组:Osterix-Cre;ACVR1 fx/+).分别提取3周龄小鼠切牙牙髓组织制备单细胞悬液,进行10×Genomics单细胞转录组测序.采用Seurat流程进行质控、标准化、降维及Harmony批次效应校正,通过UMAP降维可视化与细胞亚群鉴定;运用Monocle进行拟时序分析推断细胞分化轨迹,单细胞数据层面分析与基因ACVR1呈正相关的转录因子的变化.通过免疫荧光染色验证关键转录因子Osterix及成牙本质细胞特异性蛋白牙本质涎磷蛋白(DSPP)的定位与表达变化.结果 Sp7/Osterix在小鼠切牙间充质细胞群(GSE146123)中广泛表达,利用Osterix-Cre,可有效敲除间充质细胞中的 ACVR1.ACVR1 与成牙关键基因相关性分析显示:ACVR1 与 Msh 同源框 1(Msx1)、Msh 同源框 2(Msx2)、Sp7转录因子(Sp7)等成牙关键基因呈现正相关性.绘制对照组与实验组切牙牙髓组织单细胞图谱,并发现实验组前成牙本质细胞数量比例增加最明显,同时该亚群与成牙本质细胞分化和极化相关的关键基因的表达均下调.随后对所有间充质细胞亚群进行差异基因富集分析发现,大部分与牙本质形成相关的基因表达均下调.最后通过单细胞差异基因分析,基因随拟时序表达分析及免疫荧光染色验证,实验组中成牙本质细胞中Sp7和DSPP的表达明显下调.结论 ACVR1基因可能通过Sp7、Msx1、Msx2等转录因子促进成牙本质细胞分化进而影响牙本质的形成.

Objective To investigate the impact of activin receptor type-1(ACVR1)on odontoblastic differentiation and dentin formation based on single-cell RNA sequencing.Methods A correlation analysis of ACVR1 with odontogenesis-related transcription factors was performed using single-cell data from healthy wild-type adult mouse inci-sors obtained from the Gene Expression Omnibus database(GSE146123).This experiment was approved by the Institu-tional Animal Care and Use Committee of the affiliated institution.Conditional knockout mice with ACVR1 deleted in the dental mesenchyme were generated using the Cre-LoxP system(experimental group:Osterix-Cre;ACVR1fx/-,control group:Osterix-Cre;ACVR1fx/+).Dental pulp tissue was extracted from the incisors of 3-week-old mice to prepare single-cell suspensions for 10×Genomics single-cell transcriptome sequencing.Quality control,normalization,dimensionality reduction,and Harmony batch effect correction were performed using the Seurat pipeline,followed by UMAP dimen-sionality reduction visualization and cell subpopulation identification.Monocle was used for pseudotime analysis to infer cell differentiation trajectories,and changes in transcription factors positively correlated with ACVR1 were ana-lyzed at the single-cell data level.Immunofluorescence staining was employed to validate the localization and expres-sion changes of the key transcription factor Osterix and the odontoblast-specific protein DSPP.Results Sp7/Osterix is widely expressed in the incisor mesenchyme of mice(GSE146123).Using Osterix-Cre,ACVR1 was effectively knocked out in the mesenchyme.Gene correlation analysis between ACVR1 and key odontogenic genes showed positive correla-tions between ACVR1 and genes such as Msx1,Msx2,and Sp7.Single-cell atlases of incisor dental pulp tissue from"Osterix-Cre;ACVR1fx/-"and"Osterix-Cre;ACVR1fx/+"mice were then constructed.The most significant increase in the proportion of pre-odontoblasts was in the experimental group,along with downregulated expression of key genes re-lated to odontoblastic differentiation and polarization in this subpopulation.Differential gene enrichment analysis across all mesenchymal subpopulations indicated downregulated expression of most genes associated with dentin formation.Fi-nally,as observed through single-cell differential gene analysis,pseudotime expression analysis,and immunofluores-cence validation,the expression of Sp7 and DSPP were significantly downregulated in the experimental group.Conclu-sion The ACVR1 gene may promote odontoblastic differentiation and subsequently affect dentin formation through transcription factors such as Sp7,Msx1,and Msx2.

宋少艺;刘苍维;史册;刘麒麟;孙宏晨

吉林大学口腔医学院病理科,吉林 长春(130021)||吉林省口腔颅颌面疾病与组织重建重点实验室,吉林 长春(130021)吉林大学口腔医学院病理科,吉林 长春(130021)||吉林省口腔颅颌面疾病与组织重建重点实验室,吉林 长春(130021)吉林大学口腔医学院病理科,吉林 长春(130021)||吉林省口腔颅颌面疾病与组织重建重点实验室,吉林 长春(130021)吉林省口腔颅颌面疾病与组织重建重点实验室,吉林 长春(130021)||吉林大学口腔医院颌面外科三科,吉林 长春(130021)吉林大学口腔医学院病理科,吉林 长春(130021)||吉林省口腔颅颌面疾病与组织重建重点实验室,吉林 长春(130021)

医药卫生

成牙本质细胞分化活化蛋白A受体1型Msx1转录因子Msx2转录因子Sp7转录因子牙源性间充质细胞单细胞测序生物信息学分析

odontoblastic differentiationactivin receptor type-1Msx1 transcription factorMsx2 transcrip-tion factorSp7 transcription factordental mesenchymal cellssingle-cell sequencingbioinformatics analysis

《口腔疾病防治》 2026 (7)

642-656,15

国家自然科学基金项目(82370936) This study was supported by the grant from National Natural Science Foundation of China(No.82370936).The funder had no role in the study design,data collection and analysis,decision to publish,or preparation of the manuscript.

10.12016/j.issn.2096-1456.202660042

评论