首页|期刊导航|北方园艺|李属坏死环斑病毒甜樱桃分离物的全基因组克隆及遗传变异分析

李属坏死环斑病毒甜樱桃分离物的全基因组克隆及遗传变异分析OA

Complete Genome Sequences and Phylogenetic Analysis of a Sweet Cherry Isolate of Prunus necrotic Ringspot Virus

中文摘要英文摘要

以采集表现典型坏死斑、耳突及叶片皱缩等病毒病症状的甜樱桃叶片为试材,采用RT-PCR结合5'/3'cDNA末端快速扩增(RACE)技术,获得了1株李属坏死环斑病毒(Prunus necrotic ring spot virus,PNRSV)烟台分离物的完整基因组序列,研究了PNRSV基因组的遗传变异规律,以期为发展PNRSV高效分子检测技术、解析我国甜樱桃主产区PNRSV的流行以及制定针对性防控策略提供参考依据.结果表明:该分离物基因组由3条正义单链RNA组成,其中RNA1全长3 338 nt,RNA2全长2 581 nt,RNA3全长1 949 nt,其基因组结构与已知PNRSV分离物高度一致;基于外壳蛋白(CP)基因和移动蛋白(MP)基因构建系统进化树表明,PNRSV群体在全球范围内呈现明显的遗传多样性,不同地理来源的分离物在系统进化树上形成多个分支,显示出复杂的地理分布与种群分化特征.

Taking sweet cherry leaf samples exhibiting typical viral disease symptoms with necrotic spots,enations,and leaf curling as the test materials,RT-PCR combined with 5'/3'rapid amplification of cDNA ends(RACE)technology was used to obtain the complete genome sequence of a Prunus necrotic ringspot virus(PNRSV)isolate from Yantai.The genetic variation of the PNRSV genome was studied,in order to provide references for the development of efficient molecular detection techniques for PNRSV,understanding the epidemiology of PNRSV in major sweet cherry production areas in China,and formulating targeted control strategies.The results showed that the genome of the isolate consists of three positive-sense single-stranded RNAs,RNA1 was 3 338 nt in length,RNA2 was 2 581 nt,and RNA3 was 1 949 nt.The genome structure was highly consistent with known PNRSV isolates.Phylogenetic analysis based on the coat protein(CP)gene and movement protein(MP)gene revealed that the PNRSV population exhibits significant genetic diversity worldwide.Isolates from different geographical origins form multiple branches in the phylogenetic tree,demonstrating a complex pattern of geographical distribution and population differentiation.

王德亚;张先平;孙楠楠;李庆亮;常清乐

枣庄学院生命科学学院,山东枣庄 277160枣庄学院生命科学学院,山东枣庄 277160枣庄市农业农机技术推广中心,山东枣庄 277160枣庄学院生命科学学院,山东枣庄 277160枣庄学院生命科学学院,山东枣庄 277160

农业科技

李属坏死环斑病毒甜樱桃全基因组克隆分子变异

Prunus necrotic ringspot virussweet cherrycomplete genome cloningmolecular variability

《北方园艺》 2026 (10)

63-70,8

国家自然科学青年基金资助项目(32102143,32202269)山东省高等学校青创科技计划创新团队-特色园艺作物逆境生物学创新团队资助项目(2023KJ284).

10.11937/bfyy.20254050

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