基于转录组学测序探讨衰老驱动APP/PS1小鼠阿尔兹海默病进展的关键基因与通路OA
Exploring key genes and pathways in the progression of Alzheimer's disease in ageing-driven APP/PS1 mice based on transcriptome sequencing
目的 通过转录组测序从分子层面分析衰老对阿尔茨海默病(AD)的影响.方法 本研究以4月龄雄性WT、APP/PS1组小鼠和18月龄雄性WT、APP/PS1小鼠为研究对象.对小鼠体质量进行称重,采用Morris水迷宫、转棒和耐力实验对小鼠的学习记忆、运动功能进行评价;提取小鼠皮质总RNA进行RNA-seq建库和测序,GO和KEGG路径富集分析筛选差异表达基因,并对关键基因使用RT-qPCR进行验证.结果 与18月龄WT组和4月龄APP/PS1小鼠相比,18月龄APP/PS1小鼠体重显著降低,运动耐力、平衡协调能力下降,学习记忆功能出现明显衰退.火山图和聚类热图结果提示,APP/PS1-4vs APP/PS1-18、WT-4 vs WT-18、WT-4 vs APP/PS1-4、WT-18 vs APP/PS1-18 4个比较组样本依年龄与基因型聚类分析、基因表达模式存在显著差异.Venn图结果显示58个核心基因与衰老-AD协同叠加效应相关,并用这58个差异基因进行后续的GO、KEGG富集分析.GO、KEGG功能富集分析表明,差异基因特异性富集于与AD病理密切相关的生物学过程、细胞组分、分子功能及信号通路.RT-qPCR验证关键基因PDYN.结论 衰老可加重APP/PS1小鼠的AD相关功能损伤与病理表型,与衰老诱发AD小鼠认知障碍与运动功能衰退的关键基因有关,相关富集通路共同构成衰老驱动AD进展的核心分子调控网络.
Objective To analyze the effects of ageing on AD at the molecular level through transcriptomic se-quencing.Methods This study used 4-month-old male WT and APP/PS 1 mice,as well as 18-month-old male WT and APP/PS 1 mice.Body weights were measured,and learning and memory as well as motor function were assessed using the Morris water maze,rotarod and endurance tests;total cortical RNA was extracted for RNA-seq library preparation and sequencing,and differentially expressed genes were identified via GO and KEGG pathway enrichment analyses,with key genes validated by RT-qPCR.Results Compared with 18-month-old WT mice and 4-month-old APP/PS 1 mice,18-month-old APP/PS 1 mice exhibited significantly reduced body weight,impaired motor endurance and balance/coordination,and marked decline in learning and memory function;volcano plots and clustering heatmaps indicated that the four comparison groups(APP/PS1-4 vs APP/PS1-18,WT-4 vs WT-18,WT-4 vs APP/PS1-4,WT-18 vs APP/PS1-18)and showed significant differences in clustering analysis and gene expression patterns based on age and genotype;Venn diagram results indicated that 58 core genes were associated with the synergistic overlap effect of ageing and AD,and these 58 differentially expressed genes were used for subsequent GO and KEGG enrichment analyses;GO and KEGG functional enrichment analyses indicated that the differentially expressed genes were specifically enriched in biological processes,cellular com-ponents,molecular functions,and signaling pathways closely associated with AD pathology;RT-qPCR was used to validate the key gene PDYN.Conclusion This study confirms that ageing exacerbates AD-related func-tional impairments and pathological phenotypes in APP/PS1 mice.It is associated with key genes involved in cognitive impairment and motor decline in ageing-induced AD mice,and the relevant enriched pathways collec-tively constitute a core molecular regulatory network driving the progression of AD through ageing.
丁垚垚;杨檐;聂晶
遵义医科大学药学院基础药理教育部重点实验室,贵州遵义 563006遵义医科大学药学院基础药理教育部重点实验室,贵州遵义 563006遵义医科大学药学院基础药理教育部重点实验室,贵州遵义 563006
医药卫生
阿尔茨海默病衰老RNA测序
alzheimer's diseaseageingRNA sequencing
《遵义医科大学学报》 2026 (5)
508-516,9
国家自然科学基金资助项目(NO:82260842).
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