转录组学分析揭示HMGB1在敌草快中毒肾损伤中的作用机制OA
Investigation of HMGB1-mediated mechanisms in diquat-induced renal injury via transcriptomics
目的 利用公共数据探讨高迁移率组蛋白参与敌草快(DQ)诱导急性肾损伤的分子机制.方法 GEO数据库在线分析并下载敌草快中毒(GSE27170)及HMGB1(GSE18721)的差异基因表达数据,GSE4607作为验证集.利用R语言对差异基因进行KEGG、GO、PPI、枢纽基因筛选,sangerbox网站进行免疫浸润分析,最后通过动物实验对HMGB1表达与敌草快中毒肾损伤进行初步验证.结果 鉴定出52个枢纽基因与免疫、氧化应激及代谢过程密切相关.通过MCC算法、PPI网络筛选及独立验证数据集验证后进一步筛选,得到4个枢纽基因(NQO1、GCLM、SRXN1、HMOX1).将4个枢纽基因进行免疫浸润及相关性分析,发现NK细胞、B细胞与这些枢纽基因成呈正相关,其中以CD4+T细胞、MO 巨噬细胞的相关性更高.最后,动物实验证实HMGB1表达在DQ中毒所致肾脏病理损害中起着重要作用.结论 NQO1、GCLM、SRXN1、HMOX1是DQ中毒及HMGB1的枢纽基因,通过调控氧化应激、代谢紊乱、细胞对毒物反应及免疫反应途径参与DQ诱导的AKI.
Objective To investigate the molecular mechanisms of high-mobility group box 1 protein(HMGB1)involvement in diquat(DQ)induced acute kidney injury(AKI)using the public database.Methods Differenti-al gene expression data for diquat poisoning(GSE27170)and HMGB1(GSE18721)were analyzed and down-loaded from the GEO database,with GSE4607 serving as the validation set.Differential genes were subjected to KEGG,GO and PPI analyses.The hub genes were screened using R language.Immune infiltration analysis was performed via the Sangerbox website.Finally,animal experiments were conducted to preliminarily validate the relationship between HMGB1 expression and DQ-induced renal injury.Results Fifty-two hub genes closely relat-ed to immune response,oxidative stress,and metabolic processes were identified.Further screening through the MCC algorithm,PPI network,and independent validation dataset verification yielded four hub genes:NQO1,GCLM,SRXN1,and HMOX1.Immune infiltration and correlation analysis of these four hub genes revealed posi-tive correlations with NK cells and B cells,with particularly higher correlations observed for CD4 T cells and MO macrophages.Finally,animal experiments confirmed that HMGB1 expression plays a critical role in the renal pathological injury induced by DQ poisoning.Conclusion NQO1,GCLM,SRXN1,and HMOX1 are hub genes associated with DQ poisoning and HMGB1,participating in DQ induced AKI by regulating oxidative stress,met-abolic disorders,cellular response to toxins,and immune response pathways.
任红林;胡杰;吴瑾;廖娅;张小军;夏彩云;陆元兰
遵义医科大学附属医院急诊科,贵州遵义 563000遵义医科大学附属医院急诊科,贵州遵义 563000遵义医科大学附属医院急诊科,贵州遵义 563000遵义医科大学附属医院急诊科,贵州遵义 563000遵义医科大学附属医院急诊科,贵州遵义 563000遵义医科大学附属医院急诊科,贵州遵义 563000遵义医科大学附属医院急诊科,贵州遵义 563000
医药卫生
高迁移率组蛋白B1敌草快中毒急性肾损伤转录组学氧化应激
high mobility group box1 proteindiquat poisoningacute kidney injurytranscriptomicsoxida-tive stress
《遵义医科大学学报》 2026 (5)
472-482,11
国家自然科学基金资助项目(NO:82460385)贵州省基础研究项目[NO:黔科合基础-ZK(2023)一般579]贵州省基础研究计划项目[NO:黔科合基础-MS(2025)388].
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