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闽楠PHT基因家族鉴定及在低磷胁迫下的表达分析OA

Identification of PHT gene family and expression analysis under low phosphorus stress in Phoebe bournei

中文摘要英文摘要

[目的]闽楠 Phoebe bournei是中国南方重要的珍贵树种,其人工林生产力受低磷胁迫制约.本研究旨在全基因组范围鉴定闽楠 PHT基因家族,分析其在低磷胁迫下的表达模式,筛选受低磷胁迫诱导的主要 PHT成员,为开发磷高效利用标记基因及选育、创制耐低磷种质提供科学依据.[方法]基于闽楠全基因组数据,利用生物信息学方法鉴定PHT 基因家族成员,分析其理化性质、系统发育、染色体定位及顺式作用元件;通过低磷胁迫处理不同家系闽楠幼苗,结合实时定量 PCR(RT-qPCR)技术检测 PHT表达模式.[结果]从全基因组范围鉴定出 48个闽楠 PHT基因,不均匀分布于 12条染色体(如 LG02染色体含 11个),分为 PHT1~PHT5共 5个亚家族,其中 PHT3亚家族成员数量最多(24个).顺式作用元件分析显示:PHT基因启动子区富含激素(40.6%)和胁迫响应元件(20.6%),其中茉莉酸甲酯(304个)和脱落酸响应元件(248个)占比最高.低磷胁迫下,PHT基因呈家系和组织特异性表达,如 PbPHT3.7在低磷胁迫的"靖安"家系根系中表达上调 11倍,"宜丰"家系中 PbPHT5.1上调 4倍;茎叶中 PbPHT3.21等表达模式在家系间显著分化.[结论]从闽楠基因组鉴定出 48个 PHT基因,并筛选到低磷胁迫特异诱导表达的候选基因,为闽楠磷高效品种选育提供了关键靶基因,并为樟科Lauraceae植物磷信号网络解析提供了新视角.

[Objective]Phoebe bournei is a valuable tree species in southern regions of China,yet its plantation productivity is often constrained by low-phosphorus stress.This study aims to systematically characterize the P.bournei PHT gene family and elucidate its regulatory mechanisms under low phosphorus stress,providing a molecular basis for genetic improvement of phosphorus efficiency in P.bournei.[Method]Based on the whole-genome data of P.bournei,bioinformatics methods were employed to identify PHT family members,analyze their physicochemical properties,phylogenetic relationships,chromosomal localization,and cis-acting elements.Low phosphorus stress was applied to seedlings of different families,and reverse transcription real-time quantitative PCR(RT-qPCR)was utilized to detect expression patterns of key genes.[Result]A total of 48 PbPHT genes were identified,which distributed unevenly on 12 chromosomes,with 11 genes clustered on the LG02 chromosome.It classified into 5 subfamilies(PHT1-PHT5),with PHT3 being the l argest subfamily(24 members).Cis-element analysis revealed enrichment of hormone-responsive(40.6%)and stress-responsive elements(20.6%)in promoter regions of PHT genes,predominantly methyl jasmonate-(304)and abscisic acid(ABA)-responsive elements(248).Under low phosphorus stress,PHT gene expression exhibited family-and tissue-specific patterns.In roots,the expression level of PbPHT3.7 in the"Jing'an"family increased 11-fold,and expression level of PbPHT5.1 in the"Yifeng"family increased 4-fold.The expression divergence of PbPHT3.21 in stems and leaves was observed across families.[Conclusion]The P.bournei PHT family collaboratively regulates low phosphorus stress adaptation through cis-element diversity and family-specific expression patterns.This study identifies key candidate genes for breeding phosphorus-efficient P.bournei cultivars,and also offers new insights into phosphorus signaling networks in Lauraceae plants.

倪明阳;朱媛媛;付宁宁;王立;刘延;童再康;张俊红

浙江农林大学 全省林木育种重点实验室,浙江 杭州 311300浙江农林大学 全省林木育种重点实验室,浙江 杭州 311300浙江农林大学 全省林木育种重点实验室,浙江 杭州 311300浙江农林大学 全省林木育种重点实验室,浙江 杭州 311300浙江农林大学 全省林木育种重点实验室,浙江 杭州 311300浙江农林大学 全省林木育种重点实验室,浙江 杭州 311300浙江农林大学 全省林木育种重点实验室,浙江 杭州 311300

农业科技

闽楠PHT基因家族表达模式低磷胁迫

Phoebe bourneiPHT gene familyexpression patternslow-phosphorus stress

《浙江农林大学学报》 2026 (3)

486-495,10

江西省重点研发计划项目(20252BCF320003)国家级大学生创新创业训练计划(202210341061)

10.11833/j.issn.2095-0756.20250312

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