联合代谢组学和转录组学分析澳洲坚果幼苗对酸胁迫的响应机制OA
Integrating metabolomics and transcriptomics to analyze response mechanism of Macadamia integrifolia seedlings to acid stress
[目的]探究澳洲坚果幼苗响应酸胁迫的分子机制,筛选出类黄酮生物合成途径相关差异累积代谢物(DAMs)及差异表达基因(DEGs),为耐酸品种选育提供理论依据.[方法]以澳洲坚果品种H2实生苗为试验材料,水培条件下设3个酸胁迫组(pH 3、pH 4、pH 5),以pH 6为对照组,酸胁迫150 d后,测定幼苗根系和叶片的生理生化指标,并对根系进行广泛靶向代谢组学分析和转录组测序.[结果]与pH 6组(对照组)相比,酸胁迫提高澳洲坚果幼苗叶片CAT、APX活性和MDA、Pro、SS含量,且随着酸胁迫程度的加重整体呈升高趋势;而酸胁迫降低根系CAT、POD、APX活性和MDA、Pro含量,且随着酸胁迫程度的加重整体呈降低趋势,pH 3组与pH 6组差异极显著(P<0.01,下同).通过超高效液相色谱—串联质谱(UPLC-MS/MS)分析发现,3个比较组pH 3 vs pH 6、pH 4 vs pH 6 和 pH 5 vs pH 6 的 DAMs 数量分别为 890、238 和 259 个,pH 4 vs pH 6 和 pH 5 vs pH 6 比较组上调 DAMs 数量均高于下调DAMs,而pH 3 vs pH 6比较组下调DAMs数量远高于上调DAMs;经KEGG通路富集分析发现,pH3 vs pH 6和pH 5 vs pH 6比较组DAMs在类黄酮生物合成通路中均显著富集(P<0.05).转录组学分析结果表明,pH 3 vs pH 6、pH 4 vs pH 6和pH 5 vs pH 6比较组分别有60 529、19 057和17 593个DEGs,涉及植物激素信号转导、类黄酮生物合成、黄酮和黄酮醇生物合成等通路.在类黄酮代谢途径中筛选出15种DAMs和主要的23个DEGs,通过转录组学和代谢组学联合分析发现,黄烷酮3-羟化酶(F3H)相关基因Cluster-143294.1和黄酮醇合酶(FLS)相关基因Cluster-131918.0与根皮素呈极显著正相关;查耳酮合酶(CHS)相关基因Cluster-129867.0与二氢杨梅素呈极显著正相关,说明上述基因的表达水平与代谢物积累有关.[结论]澳洲坚果幼苗受酸胁迫后,叶片抗氧化酶活性及渗透调节物质含量提高,但在根系中含量降低.类黄酮生物合成途径中,F3H、CHS、FLS等酶相关基因在酸胁迫后上调表达,并促进代谢物根皮素、二氢杨梅素等积累,表明澳洲坚果通过调控基因表达水平,调节代谢物积累,以应对酸胁迫.
[Objective]The paper aimed to explore the molecular mechanism of Macadamia integrifolia seedlings in response to acid stress,screen differentially accumulated metabolites(DAMs)and differentially expressed genes(DEGs)related to the flavonoid biosynthesis path-way,and provide theoretical basis for the breeding of acid-tolerant varieties.[Method]Using the seedling of M.integrifolia variety H2 as the research material,three acid stress treatments(pH 3,pH 4,pH 5)were set up under hydroponic conditions,with pH 6 serving as the control(CK).After 150 days of treatment,physiological and biochemical indicators of the seedling roots and leaves were measured,and extensive targeted metabolomics analysis and transcriptome sequencing were conducted on the roots.[Result]Compared with the pH 6 group(con-trol),acid stress increased the activities of CAT,APX and the contents of MDA,Pro and SS in leaves of M.integrifolia seedlings,and showed an overall upward trend with the aggravation of acid stress.However,acid stress reduced the activities of CAT,POD,APX and the contents of MDA and Pro in roots,and showed a decreasing trend with the aggravation of acid stress.There was extremely significant difference between pH 3 group and pH 6 group(P<0.01,the same as below).Ultra performance liquid chromatography tandem mass spectrometry(UPLC-MS/MS)analysis showed that the number of DAMs in the three comparison groups of pH 3 vs pH 6,pH 4 vs pH 6,and pH 5 vs pH 6 was 890,238 and 259,respectively.In both pH 4 vs pH 6 and pH 5 vs pH 6 comparison groups,the number of up-regulated DAMs was higher than that of down-regulated ones,whereas in pH 3 vs pH 6 comparison group,the number of down-regulated DAMs was much higher than that of up-regulated ones.The enrichment analysis of KEGG pathway showed that DAMs in the comparison groups of pH 3 vs pH 6 and pH 5 vs pH 6 were significantly enriched in flavonoid biosynthesis pathway(P<0.05).Transcriptome analysis showed that there were 60 529,19057 and 17 593 DEGs in the comparison groups of pH 3 vs pH 6,pH 4 vs pH 6 and pH 5 vs pH 6,respectively,involving plant hormone sig-nal transduction,flavonoid biosynthesis,flavonoid and flavonol biosynthesis.Through the combined analysis of transcriptomics and metabo-nomics,15 kinds of DAMs and 23 DEGs were screened.The flavanone 3-hydroxylase(F3H)related gene Cluster-143294.1 and flavonol syn-thase(FLS)related gene Cluster-131918.0 were extremely significantly positively correlated with phloretin;chalcone synthase(CHS)relat-ed gene Cluster-129867.0 was extremely significantly positively correlated with dihydromyricetin,indicating that the expression level of these genes was related to the accumulation of metabolites.[Conclusion]After acid stress,the activities of antioxidant enzymes and osmotic adjust-ment substances in leaves of M.integrifolia seedlings increased,but decreased in roots.In the flavonoid biosynthesis pathway,F3H,CHS,FLS and other enzyme related genes were up-regulated after acid stress,and promoted the accumulation of metabolites phloretin,dihydromyricetin and so on,indicating that M.integrifolia can respond to acid stress by regulating gene expression level and regulating metabolite accumulation.
环秀菊;谭秋锦;潘浩男;覃潇敏;贺鹏;杨小州;潘贞珍;王文林;覃振师;郑树芳
广西南亚热带农业科学研究所,广西崇左 532415广西南亚热带农业科学研究所,广西崇左 532415广西南亚热带农业科学研究所,广西崇左 532415广西南亚热带农业科学研究所,广西崇左 532415广西南亚热带农业科学研究所,广西崇左 532415广西南亚热带农业科学研究所,广西崇左 532415广西南亚热带农业科学研究所,广西崇左 532415广西南亚热带农业科学研究所,广西崇左 532415广西南亚热带农业科学研究所,广西崇左 532415广西南亚热带农业科学研究所,广西崇左 532415
农业科技
澳洲坚果酸胁迫类黄酮转录组学代谢组学关联分析
Macadamia integrifoliaAcid stressFlavonoidsTranscriptomicsMetabolomicsAssociation analysis
《西南农业学报》 2026 (4)
691-707,17
广西农业科学院基本科研业务专项(桂农科2023YM22,桂农科2021YT156,桂农科2024YP115)科技先锋队"强农富民""六个一"专项行动项目(桂农科盟202504)广西科技计划项目(桂科AC23026001)广西南亚热带农业科学研究所自筹项目(NYS2025ZC01)
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