黄瓜磷信号SPX基因家族鉴定OA
Identification of the SPX Gene Family in Cucumber Phosphorus Signaling
含有SPX结构域的基因在调控黄瓜植株体内磷酸盐(Pi)稳态中发挥关键作用.基于黄瓜基因组数据,利用生物信息学方法,从中鉴定并分析16个含SPX结构域的基因,对其理化性质、保守结构域、启动子等进行分析,并构建了系统进化树明确成员间的关系.结果表明,16个CsSPX基因分布在黄瓜的6条染色体上,并依据其结构特征被划分为4个不同的亚家族,分别为SPX、SPX-MFS、SPX-EXS、SPX-RING,相对分子质量为28.58~95.80 kDa,编码氨基酸长度为246~830 aa.此外,对黄瓜SPX基因(CsSPXs)进行了共线性以及顺式作用元件分析,表明其启动子区域富含多种激素响应元件、生物与非生物胁迫响应元件以及典型的P1BS相关元件.CsSPX基因的组织表达谱分析表明,CsPHO1、CsPHO1.1、CsSPX-MFS1、CsSPX-MFS2、CsNLA1和CsNLA2基因在特定器官中表现出较高的表达水平,表明其在黄瓜生长发育过程中可能发挥重要作用,为利用SPX基因改良黄瓜磷利用效率提供了潜在分子靶点.
SPX domain-containing genes play a crucial role in regulating phosphate(Pi)homeostasis in cucumber plants.In this study,based on cucumber genome data,16 genes containing the SPX domain were identified and analyzed using bioinformatics ap-proaches.Their physicochemical properties,conserved domains,and promoters were analyzed,and a phylogenetic tree was construct-ed to clarify the relationships among the members.Results showed that the 16 CsSPX genes were distributed on 6 chromosomes of cu-cumber and were classified into 4 subfamilies according to their structural characteristics,namely SPX,SPX-MFS,SPX-EXS,and SPX-RING.Their relative molecular masses ranged from 28.58 to 95.80 kDa,and the encoded amino acid lengths ranged from 246 to 830 aa.In addition,collinearity and cis-acting element analyses of cucumber SPX genes(CsSPXs)were performed.Results indicat-ed that their promoter regions contained a variety of hormone-responsive elements,biotic and abiotic stress-responsive elements,as well as typical P1BS-related elements.Tissue expression profile analysis of CsSPX genes showed that CsPHO1,CsPHO1.1,CsSPX-MFS1,CsSPX-MFS2,CsNLA1,and CsNLA2 exhibited relatively high expression levels in specific organs,suggesting that they may play important roles in cucumber growth and development.This study provides potential molecular targets for improving the phospho-rus utilization efficiency in cucumbers by using the SPX gene.
后建霞;魏林溪;于嘉文
甘肃省农业科学院张掖节水农业试验站,甘肃 张掖 734000甘肃省农业科学院张掖节水农业试验站,甘肃 张掖 734000甘肃省农业科学院张掖节水农业试验站,甘肃 张掖 734000
农业科技
黄瓜SPX基因家族生长发育生信分析
CucumberSPX gene familyGrowth and developmentBioinformatics analysis
《寒旱农业科学》 2026 (5)
422-429,8
甘肃省农业科学院科技成果转化项目(2026GAAS-CGZH04).
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