2024年四川省登革热实验室检测阳性病例分子流行病学分析OA
Molecular epidemiological analysis of laboratory test positive dengue fever cases in Sichuan Province,2024
目的 了解2024年四川省登革热的流行特征和毒株的基因特征.方法 对疑似病例样本分别进行登革病毒(DENV)核酸和IgM抗体检测并对阳性病例信息进行统计分析,对核酸阳性样本进行DENV靶向捕获和全基因组测序,测序后进行系统进化、同源性和变异分析.结果 经检测84例为DENV核酸阳性,4例为DENV IgM抗体阳性.核酸阳性病例包括四种血清型(DENV-1~4),DENV-1为主要型别(占比52.1%).全基因组测序获得43株DENV全基因组序列,27株为DENV-1,包括Genotype Ⅰ型和Genotype Ⅳ型,以Genotype Ⅰ型为主;12株DENV-2,均为Cosmopolitan基因型;3株DENV-3,均属于Genotype Ⅲ型;1株DENV-4为Genotype Ⅰ型.DENV-1、DENV-2、DENV-3毒株型别内核苷酸相似性分别为89.7%~99.9%、95.6%~100%和88.3%~99%.变异位点分析发现,部分毒株在prM、E及NS3(435)等关键位点发生变异.结论 2024年四川省多个市、州检测到登革热病例,面临登革病毒境外输入与国内扩散的双重压力,主要来源于东南亚国家及我国广东、云南省,且由输入病例引发了本地传播.输入毒株基因具有丰富的多样性并监测到部分毒株在关键氨基酸位点发生改变.
This study explored the epidemiological characteristics and genetic features of dengue virus(DENV)strains in Sich-uan Province in 2024,to provide data to support monitoring and control efforts.We tested suspected case samples for DENV nucleic acid and IgM antibodies,and analyzed the positive cases.Nucleic acid positive samples underwent DENV-targeted capture and whole-genome sequencing,followed by phylogenetic,homology,and mutation analyses.A total of 84 cases were positive for DENV nucleic acid,and 4 cases were positive for DENV IgM antibodies.The nucleic acid positive cases included all four serotypes(DENV-1 to 4),among which DENV-1 predominated(52.1%).Whole-genome sequencing yielded 43 complete DENV genome sequences:27 DENV-1 strains(primarily genotype Ⅰ,with some genotype Ⅳ),12 DENV-2 strains(all Cosmopolitan genotype),3 DENV-3 strains(all genotype Ⅲ),and 1 DENV-4 strain(genotype Ⅰ).The nucleotide similarities were 89.7%-99.9%for DENV-1,95.6%-100%for DENV-2,and 88.3%-99%for DENV-3.Mutation analysis revealed variations in key sites such as prM,E,and NS3(435)in some strains.This study revealed that multiple regions in Sichuan Province are under dual pressure from both imported and domestically circulating dengue virus strains.The imported strains originated primarily from Southeast Asian countries and China's Guangdong Province and Yunnan Province,and were subsequently transmitted locally.The imported strains exhibited high genetic di-versity,and mutations were observed at critical amino acid sites.
冯玉亮;钟红荣;张青;蒋明凤;曹一鸥;潘明;李伟
四川省疾病预防控制中心,成都 610041四川省疾病预防控制中心,成都 610041四川国际旅行卫生保健中心(成都海关口岸门诊部),成都 610041四川省疾病预防控制中心,成都 610041四川省疾病预防控制中心,成都 610041四川省疾病预防控制中心,成都 610041四川省疾病预防控制中心,成都 610041
医药卫生
登革热分子流行病学实验室检测基因型全基因组测序
dengue fevermolecular epidemiologylaboratory testgenotypewhole genome sequencing
《中国人兽共患病学报》 2026 (3)
244-250,7
四川省科技计划项目(No.2024YFFK0056) Sichuan Provincial Science and Technology Program Project(No.2024YFFK0056).
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