GRAS基因在梭梭幼苗生长发育过程的表达分析OA
Expression Analysis of GRAS Genes in the Growth and Development of Haloxylon ammodendron Seedlings
GRAS 转录因子家族在植物生长发育、激素信号转导及逆境适应中发挥核心调控作用.本研究系统鉴定荒漠木本 C4 植物梭梭 GRAS 基因家族成员,解析其分子特征与表达模式.采用生物信息学方法对梭梭 GRAS 基因家族进行全基因组鉴定,并深入分析基因家族成员的蛋白理化性质、染色体定位、保守基序、结构域组成、系统进化关系、共线性及启动子顺式作用元件等特征.结果显示,梭梭 GRAS 转录因子家族包含 26 个家族成员,可划分为 8 个保守亚族.顺式作用元件分析发现,GRAS 转录因子家族成员启动子区域包含光响应、激素响应及逆境响应等元件.表达分析显示,2 6 个 GRAS 基因呈现显著时空特异性,相较于子叶期(C3 代谢途径)分别有 34.6%和23.1%的基因在同化枝形成时期和成熟同化枝时期(C4 代谢途径)显著上调表达.蛋白互作网络预测显示,SCL2 3、S H R、SCL9、SCL3 形成核心互作模块.本研究为解析梭梭生长发育及光合类型转换的分子机制提供了理论依据与候选基因资源.
The GRAS transcription factor family plays a central regulatory role in plant growth and develop-ment,hormone signaling,and stress adaptation.This study aimed to systematically identify members of the GRAS gene family in the desert woody C4 plant H.ammodendron and to analyze their molecular charac-teristics and expression patterns.Using bioinformatic approaches,we performed genome-wide identification of the GRAS gene family in H.ammodendron and conducted comprehensive analyses of the protein physi-cochemical properties,chromosomal localization,conserved motifs,domain composition,phylogenetic rela-tionships,collinearity,and promoter cis-acting elements of its members.The results demonstrated that the GRAS transcription factor family in H.ammodendron consists of 26 members,which can be divided into 8 conserved subfamilies.The cis-acting element analysis revealed that the promoter region of the GRAS tran-scription factor family contains light-responsive,hormone-responsive and stress-responsive elements.Ex-pression analysis revealed that 26 GRAS genes exhibited significant spatiotemporal specificity,with 34.6%and 23.1%of genes,respectively,showing significantly upregulated expression during assimilative branch formation and mature assimilative branch stages(C4 metabolic pathway)compared to the cotyledon stage(C3 metabolic pathway).Protein interaction network prediction indicated that SCL23,SHR,SCL9,and SCL3 formed a core interaction module.This study provides a theoretical basis and candidate gene re-sources for elucidating the molecular mechanisms underlying growth,development,and photosynthetic transition in H.ammodendron.
赵浩然;谭定权;王媛媛;胡玥莹;张胜
西北农林科技大学 林学院/陕西省林业综合重点实验室,陕西 杨凌 712100重庆理工职业学院 卫生健康学院,重庆 401320西北农林科技大学 林学院/陕西省林业综合重点实验室,陕西 杨凌 712100西北农林科技大学 林学院/陕西省林业综合重点实验室,陕西 杨凌 712100西北农林科技大学 林学院/陕西省林业综合重点实验室,陕西 杨凌 712100
农业科技
梭梭GRAS基因家族表达模式光合类型转换
H.ammodendronGRAS gene familyexpression patternphotosynthetic transition
《西北林学院学报》 2026 (3)
16-28,13
国家自然科学基金(31960333).
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