基于单细胞多组学解析生长激素腺瘤的转录-翻译解偶联机制OA
Elucidating the transcription-translation uncoupling mechanism in somatotroph adenomas via single-cell multi-omics
目的 探讨生长激素腺瘤中的稀疏颗粒型(SGST)的转录组与翻译组异质性,并进一步解析基因表达在转录与翻译水平的协同机制.方法 对 1 例 SGST 患者的肿瘤组织样本进行单细胞转录组测序(scRNA-seq)与单细胞(翻译组)核糖体印迹测序(scRibo-seq).利用降维聚类鉴定细胞亚群,通过 CytoTRACE 算法评估细胞分化状态,并通过比较基因 RNA、翻译水平的表达,探究侵袭相关基因的转录-翻译关联特征.结果 识别包括肿瘤细胞、周细胞和内皮细胞在内的 3 类细胞亚群,其中肿瘤细胞占比 94.9%.肿瘤细胞表现出高度异质性,可进一步细分为"增殖型""氧化磷酸化型"及"垂体样"等不同功能状态.CytoTRACE 分析显示,低分化肿瘤亚群显著下调核糖体生物合成与翻译通路,同时上调氧化磷酸化及自噬相关通路,提示翻译活性的抑制可能与维持肿瘤低分化密切相关.联合分析发现显著的转录-翻译解偶联现象:MMP1、SNAI2 等侵袭关键基因虽转录水平低,但翻译效率显著升高;相反,核糖体相关基因表现出低翻译效率.结论 SGST 具有显著的转录组异质性,低分化亚群通过抑制核糖体生物合成维持低代谢低分化状态.肿瘤细胞并非依赖转录丰度,而是通过特异性提升翻译效率来驱动侵袭相关蛋白的快速合成,这揭示了 SGST 侵袭性生长的关键转录后调控机制.
Objective To investigate the transcriptomic and translatomic heterogeneity of sparsely granulated som-atotroph tumor(SGST)and to elucidate the synergistic mechanisms of gene expression at the transcriptional and translational level.Methods Single-cell RNA sequencing(scRNA-seq)and single-cell ribosome sequencing(scRibo-seq)were performed on tumor tissue samples from one patient with SGST.Dimensionality reduction and clustering were utilized to identify cell subpopulations.The CytoTRACE algorithm was applied to assess cell differ-entiation states.By comparing gene expression at both RNA and translational level,the transcriptional-translational association characteristics of invasion-related genes were explored.Results Three distinct cell sub-populations were identified,including tumor cells,pericytes,and endothelial cells,with tumor cells accounting for 94.9%.The tumor cells exhibited high heterogeneity and could be further subdivided into distinct functional states,including"proliferative""oxidative phosphorylation(OXPHOS)"and"pituitary-like"subtypes.Cyto-TRACE analysis indicated that low different ion state of some tumor subpopulations significantly down-regulated ri-bosome biogenesis and translation pathways while up-regulated OXPHOS and autophagy-related pathways,sug-gesting that the inhibition of translational activity might be closely related to the maintenance of a poorly differenti-ated tumor state.Integrated analysis revealed a significant transcriptional-translational uncoupling:Key invasion genes such as MMP1 and SNAI2 showed low transcriptional levels but significantly elevated translation efficiency.Conversely,ribosome-related genes exhibited low translation efficiency.Conclusions SGST possesses significant transcriptomic heterogeneity,where subpopulations of low differention maintain a hypometabolic and undifferenti-ated state by suppressing ribosome biogenesis.Rather than relying on transcriptional abundance,tumor cells drive a rapid synthesis of invasion-related proteins by specifically enhancing translation efficiency.This reveals a key post-transcriptional regulatory mechanism underlying the invasive growth of SGST.
吴加旻;吴尹子;王芳;余佳;马艳妮;王小爽
中国医学科学院北京协和医学院 基础医学研究所 重大疾病共性机制研究全国重点实验室,北京 100005中国医学科学院北京协和医学院 北京协和医院 神经外科,北京 100730中国医学科学院北京协和医学院 基础医学研究所 重大疾病共性机制研究全国重点实验室,北京 100005中国医学科学院北京协和医学院 基础医学研究所 重大疾病共性机制研究全国重点实验室,北京 100005中国医学科学院北京协和医学院 基础医学研究所 重大疾病共性机制研究全国重点实验室,北京 100005中国医学科学院北京协和医学院 基础医学研究所 重大疾病共性机制研究全国重点实验室,北京 100005
医药卫生
生长激素腺瘤稀疏颗粒型单细胞转录组测序单细胞(翻译组)核糖体印迹测序翻译效率
somatotroph adenomasparsely granulatedsingle-cell RNA sequencingsingle-cell ribosome sequencingtranslation efficiency
《基础医学与临床》 2026 (5)
666-672,7
国家自然科学基金(82170799)
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