毛竹GLP基因家族成员鉴定及其表达调控研究OA
Identification and Expression Regulation of GLP Gene Family in Phyllostachys edulis
类萌发素蛋白(GLPs)通过与细胞壁交联对细胞壁起强化作用.为探究毛竹(Phyllostachys edulis)GLP家族成员的分子特征及其在细胞壁交联中的功能,利用生物信息学与分子生物学等方法对PeGLPs家族成员进行了鉴定和系统分析,基于毛竹快速生长相关的RNA-Seq数据和实时荧光定量PCR(qRT-PCR)技术分析GLP基因的表达模式,借助酵母单杂交、DLR(dual luciferase reporter)等试验验证转录因子NAC与PeGLP8的调控关系,在拟南芥(Arabidopsis thaliana)中异源表达PeGLP8并初步研究其功能.在毛竹中共鉴定到103个GLP基因家族成员(PeGLP1~PeGLP103),大多数PeGLPs编码的蛋白结构域具有较高的保守性,均包含3个Box结构域.顺式作用元件预测结果显示,PeGLPs的启动子中存在多个木质素相关转录因子NAC和MYB的响应元件.共线性分析显示,Pe GLPs的Ka/Ks值大部分小于1.0,说明纯化选择是该家族成员的主要进化方式.系统发育分析结果表明,GLP家族成员被分成七个亚家族,其中Group 7亚家族中PeGLPs成员最多(27个).基于RNA-Seq数据分析显示,PeGLP8的表达差异显著,并与多个细胞壁相关转录因子基因呈现共表达,其中PeGLP8和PeNAC42的表达与毛竹笋速生过程中木质化程度呈现相似的趋势.酵母单杂交以及DLR试验结果证实,PeNAC42能够与PeGLP8的启动子结合并激活其表达;过表达PeGLP8拟南芥株高增加,细胞壁加厚,细胞明显伸长,木质素含量显著增加.推测毛竹中PeGLP8通过参与细胞壁交联以及木质素的沉积,进而影响竹材的形成.本研究结果为揭示竹材质量形成的分子机制提供了理论基础.
Germin-like proteins(GLPs)reinforce cell walls through cross-linking interaction.To investigate the molecular characteristics of GLP family members and their roles in cell wall cross-linking in Moso bamboo(Phyllostachys edulis),this study identified and systematically analyzed PeGLPs family members using integrated bioinformatics and molecular biology approaches.Based on RNA-Seq data associated with rapid growth of Moso bamboo and quantitative real-time PCR(qRT-PCR)assays,the expression pattern of GLP genes was analyzed,and the regulatory relationship between the transcription factor NAC and PeGLP8 was validated by the yeast one-hybrid(Y1H)and DLR(Dual luciferase reporter)assays,and the function of PeGLP8 was characterized by heterologous expression in Arabidopsis thaliana.A total of 103 GLP gene family members were identified in Moso bamboo(PeGLP1~PeGLP103).The protein domains encoded by most PeGLPs were highly conserved,encompassing three conserved Box domains.Cis-acting element prediction showed that the promoters of PeGLPs contain multiple response elements for lignin-related transcription factors,including NAC and MYB.Collinearity analysis showed that Ka/Ks ratios of most PeGLPs were less than 1.0,indicating that purifying selection has been the dominant evolutionary force shaping this family members.Phylogenetic analysis of GLPs from Moso bamboo,rice and Arabidopsis classified GLPs into seven subfamilies,with Group 7 containing the highest number of PeGLPs members(27).Based on RNA-Seq data analysis,PeGLP8 exhibited significantly different expression patterns and was co-expressed with multiple cell wall-related transcription factor genes.Among them,the expression levels of PeGLP8 and PeNAC42 showed similar trends corresponding to the degree of lignification during the rapid growth of bamboo shoots.Results from Y1H and DLR experiments confirmed that PeNAC42 can bind to the promoter of PeGLP8 and activate its expression.Heterologous overexpression of PeGLP8 in Arabidopsis led to increased plant height,cell walls thickening,significant cell elongation,and a significant increase in lignin content.It is speculated that PeGLP8 contributes to bamboo quality formation by participating in cell wall cross-linking and lignin deposition.The results of this study provide a theoretical basis for revealing the molecular mechanism underlying bamboo quality formation.
狄小琳;李慧;朱成磊;孔鑫;李雪平;高志民
国际竹藤中心竹藤资源基因科学与基因产业化研究所,北京 100102||竹藤科学与技术国家林业和草原局重点实验室,北京 100102国际竹藤中心竹藤资源基因科学与基因产业化研究所,北京 100102||竹藤科学与技术国家林业和草原局重点实验室,北京 100102浙江农林大学森林食物资源挖掘与利用全国重点实验室,浙江 杭州 311300北京林业大学园林学院/北京市观赏植物种质创新与分子育种重点实验室,北京 100083国际竹藤中心竹藤资源基因科学与基因产业化研究所,北京 100102||竹藤科学与技术国家林业和草原局重点实验室,北京 100102国际竹藤中心竹藤资源基因科学与基因产业化研究所,北京 100102||竹藤科学与技术国家林业和草原局重点实验室,北京 100102
毛竹类萌发素蛋白细胞壁交联转录调控木质素
Phyllostachys edulisgermin-like proteinscell wall cross-linkingtranscriptional regulationlignin
《核农学报》 2026 (6)
1136-1148,13
国家自然科学基金重大项目(32494791)
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