全基因重测序鉴定航天花生突变系基因组变异特性OA
Identification of Genomic Variation Characteristics of Space Peanut Mutant Lines by Whole-Genome Re-sequencing
为挖掘花生油脂相关基因,本研究以广东省河源市本地花生品种火豆和经过太空诱变花生突变株系(突变第八代,M8)为试验材料,该突变株系在单株产量、单株总果数、单株饱果数等关键产量性状上较原始品种火豆有所提升,同时呈现株型紧凑的优良农艺特性.利用花生全基因组重测序进行基因分析,通过与参考基因组(GCF_003086295)比对,系统检测基因组中的遗传变异,共检测到单核苷酸变异(SNP)545 416个、插入缺失(InDel)167 629个、拷贝数变异(CNV)3 032个、结构变异(SV)3 525个.其中筛选出66个与花生油脂代谢有关的基因,包括酰基转移酶基因(DGAT)和三酰甘油脂肪酶SDP1等基因家族成员.突变系与对照的差异分析显示,突变体粗脂肪(48.62%)和油酸(39.37%)含量高于对照,粗蛋白和亚油酸含量较低.候选基因在油脂合成通路中发挥着重要作用,其错义突变可能通过改变酶活性中心构象影响甘油三酯的合成效率,这为后续功能验证提供了重要靶点,为探究花生航天育种的分子机制提供了参考.
In this study,to explore the genes related to peanut oil biosynthesis,a local peanut cultivar Huodou from Heyuan City,Guangdong Province,and a space-induced peanut mutant line(the 8th mutant generation,M8)were used as experimental materials.Compared with the original Huodo cultivar,the mutant line exhibited significant improvements in key yield-related traits(single-plant yield,total pods per plant,full pods per plant),while also displaying the superior agronomic characteristic of a compact plant architecture.Whole-genome resequencing was performed on both lines to conduct genetic variation analysis.By aligning against the reference genome(GCF_003086295),a range of genetic variations were systematically identified,including a total of 545416 single nucleotide polymorphisms(SNPs),167629 insertions and deletions(InDels),3032 copy number variations(CNVs),and 3525 structural variations(SVs).Among these variations,66 genes associated with peanut oil metabolism were screened out,including members of key gene families such as acyltransferase genes(DGATs)and SDP1 triglyceride lipase genes.Combined with quality trait evaluation,comparative analysis between the mutant line and the control revealed that the mutant exhibited significantly higher contents of crude fat(48.62%)and oleic acid(39.37%),whereas crude protein and linoleic acid contents were relatively lower.Functional annotation indicated that these candidate genes play important roles in the oil synthesis pathway.Notably,missense mutations in these genes may alter the conformation of the enzyme active center,thereby influencing the efficiency of triglyceride synthesis.These findings provide important target genes for subsequent functional validation studies and offer valuable references for exploring the molecular mechanisms underlying peanut space breeding.
邹仪妹;李少雄;王键宽;王加峰;洪彦彬;刘浩;黄红保
广东省农业科学院作物研究所/广东省农作物遗传改良重点实验室,广东 广州 510640||华南农业大学国家植物航天育种工程技术研究中心,广东 广州 510642广东省农业科学院作物研究所/广东省农作物遗传改良重点实验室,广东 广州 510640广东兆华航天育种创新研究院,广东河源 517025华南农业大学国家植物航天育种工程技术研究中心,广东 广州 510642广东省农业科学院作物研究所/广东省农作物遗传改良重点实验室,广东 广州 510640广东省农业科学院作物研究所/广东省农作物遗传改良重点实验室,广东 广州 510640阳江市农作物技术推广站,广 东阳江 529500
花生油脂基因基因组重测序航天育种
peanutoil genesgenome resequencingspace breeding
《核农学报》 2026 (6)
1077-1087,11
河源市科技计划项目(河源涉农大专项2022002),广东省现代种业重点研发计划(2022B0202060004),国家重点研发计划(2023YFD1202800),国家花生产业技术体系(CARS-13)
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