大豆脂肪含量QTL基因定位及分析OA
QTL Mapping and Analysis of Oil Content in Soybean
脂肪含量是大豆重要的品质性状,受多基因控制,为定位大豆脂肪含量相关位点并挖掘候选基因,利用齐小粒1 号与绥农76 杂交构建的335 个单株组成的 F2群体,根据中豆芯一号200K 基因芯片 SNP 标记和 SSR 分子标记的基因型信息,使用德国 Bruker MPA 近红外光谱仪测定种子脂肪含量,对 F2和 F3群体进行基因型鉴定,通过 IciMapping 4.2 软件的复合区间作图法(Inclusive Composite Interval Mapping,ICIM)定位 QTL,结合 SoyBase、Phytozome v13.1 及RNA-seq 数据筛选候选基因.结果显示,利用 F2群体在15 号染色体上获得大小为454.45 kb 的定位区间.在此基础上利用 F3 群体为材料,加密标记,将区间缩小至 164 kb,包含 22 个基因,共获得了 1 个 QTL,q Oil-15-2.区间大小为164 kb,包含22 个基因,表型贡献率为6.74%.对基因在 Phytozome 网站不同组织和转录组数据的表达量进行分析,得到4 个候选基因,分别为 Glyma.15g025800、Glyma.15g026300、Glyma.15g026400 和 Glyma.15g026500.研究结果为大豆脂肪基因图位克隆及分子标记辅助育种提供材料和技术支撑,对定向培育高油大豆品种具有重要意义.
Oil content is a crucial quality trait in soybeans,controlled by multiple genes.To locate loci associated with soybean oil content and identify candidate genes,this study used an F2 population consisting of 335 individuals derived from the cross between Qixiaoli 1 and Suinong 76.Genotypic information was obtained using the Zhongdouxin-1 200K SNP array and SSR molecular markers.The oil content of soybean seeds was determined using a Bruker(Germany)MPA near-infrared spectrometer.Genotyping was performed on both the F2 and F3 populations,and quantitative trait locus(QTL)mapping was conducted using the Inclusive Composite Interval Mapping(ICIM)method in IciMapping4.2 software.Candidate genes were screened by integrating data from SoyBase,Phytozome v13.1,and RNA-seq.The results showed that a 454.45 kb mapped interval was identified on chromosome 15 using the F2 population.Using the F3 population for marker densification,this interval was narrowed down to 164 kb,containing 22 genes.One QTL,designated q Oil-15-2,was detected within this 164 kb interval,explaining 6.74%of the phenotypic variation.Analysis of gene expression levels across different tissues(from Phytozome)and transcriptome data led to the identification of four candidate genes:Glyma.15g025800,Glyma.15g026300,Glyma.15g026400 and Glyma.15g026500.These findings provide materials and technical support for map-based cloning of soybean oil-related genes and molecular marker-assisted breeding,and hold significant importance for the directed cultivation of high-oil soybean varieties.
张珂宇;袁明;韩冬伟;于莉莉;苏鑫;任洪雷;杜吉到;邱丽娟
黑龙江八一农垦大学 农学院,黑龙江 大庆 163319||中国农业科学院 作物科学研究所/农作物基因资源与遗传改良国家重大科学工程/农业农村部北京大豆生物学重点实验室,北京 100081黑龙江省农业科学院 齐齐哈尔分院,黑龙江 齐齐哈尔 161006黑龙江省农业科学院 齐齐哈尔分院,黑龙江 齐齐哈尔 161006中国农业科学院 作物科学研究所/农作物基因资源与遗传改良国家重大科学工程/农业农村部北京大豆生物学重点实验室,北京 100081中国农业科学院 作物科学研究所/农作物基因资源与遗传改良国家重大科学工程/农业农村部北京大豆生物学重点实验室,北京 100081黑龙江省农业科学院 大豆研究所,黑龙江 哈尔滨 150086黑龙江八一农垦大学 农学院,黑龙江 大庆 163319中国农业科学院 作物科学研究所/农作物基因资源与遗传改良国家重大科学工程/农业农村部北京大豆生物学重点实验室,北京 100081
大豆脂肪含量QTL定位候选基因
soybeanoil contentQTL mappingcandidate genes
《大豆科学》 2026 (2)
1-12,12
农业生物育种重大项目(2022ZD04007)黑龙江省省属科研业务费(CZKYF2024-1-B019).
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