黄瓜韧皮部核心细菌群落结构及其功能解析OA
Study of Core Bacterial Community Composition and Function in Phloem Sap of Cucumber
植物内生微生物在调控宿主养分吸收及抗逆性中发挥重要作用,然而宿主遗传变异如何驱动特定微生物群落的形成仍不清楚.以维管系统模式作物黄瓜为研究对象,聚焦植物同化物运输的关键部位韧皮部的汁液,通过16SrRNA扩增子测序技术系统解析不同基因型黄瓜韧皮部液内生细菌群落的组成特征.研究发现,各基因型黄瓜韧皮部液细菌群落均以变形菌门(Proteobacteria)为优势菌群,从中鉴定出13个核心扩增子序列变异(ASV).全基因组关联分析(GWAS)发现核心ASV Stenotrophomonas_ASV1的相对丰度与CsaV3_4G035400基因(编码木聚糖酶)转录终止调控区的1个SNP变异显著关联,即Chr4_24 974 285.功能研究表明,与Stenotrophomonas_ASV1序列一致的菌株Stenotrophomonas sp.295可显著促进黄瓜幼苗生长.本研究揭示了植物木聚糖酶相关基因在调控特定内生菌招募中的潜在机制,为解析宿主基因-微生物互作机制提供了新视角.
Plant endophytic microorganisms play a crucial role in regulating host nutrient absorption and stress resistance.However,the mechanisms by which host genetic factors drive the formation of specific microbial communities remain unclear.This study investigated cucumber,a model crop with a vascular system,focusing on the phloem-a key site for assimilate transport.Using 16S rRNA amplicon sequencing,we systematically analyzed the composition characteristics of endophytic bacterial communities in phloem tissues across different cucumber genotypes.Results showed that Proteobacteria dominated the phloem bacterial communities in all genotypes.Thirteen core amplicon sequence variants(ASVs)were identified,with culturable strains successfully isolated.Genome-wide association study(GWAS)revealed that the relative abundance of core ASV Stenotrophomonas_ASV1 showed significant association with SNP locus Chr4_24 974 285.The corresponding gene CsaV3_4G035400,encoding a xylanase-active protein,was identified as a potential key regulator of microbial recruitment.Functional validation demonstrated that this bacterial strain significantly promotes cucumber seedling growth.Our findings highlight the potential role of plant xylanase-related genes in regulating specific endophyte recruitment,providing new insights into host gene-microbe interaction mechanisms.
朱雪莹;王昆;郑盈盈;叶晓龙;柴森;魏海雷;秦宇轩;杨学勇
青岛农业大学园艺学院,山东青岛 266109||中国农业科学院蔬菜花卉研究所,蔬菜生物育种全国重点实验室,北京 100081中国农业科学院蔬菜花卉研究所,蔬菜生物育种全国重点实验室,北京 100081中国农业科学院蔬菜花卉研究所,蔬菜生物育种全国重点实验室,北京 100081青岛农业大学园艺学院,山东青岛 266109青岛农业大学园艺学院,山东青岛 266109中国农业科学院农业资源与农业区划研究所,农业农村部农业微生物资源收集与保藏重点实验室,北京 100081中国农业科学院蔬菜花卉研究所,蔬菜生物育种全国重点实验室,北京 100081青岛农业大学园艺学院,山东青岛 266109||中国农业科学院蔬菜花卉研究所,蔬菜生物育种全国重点实验室,北京 100081
黄瓜韧皮部细菌群落结构16SrRNA扩增子测序全基因组关联分析
cucumberphloem bacterial community structure16S rRNA amplicon sequencinggenome-wide association study(GWAS)
《中国蔬菜》 2026 (3)
70-80,11
中国农业科学院创新工程项目(CAAS-ASTIP-2025-IVF)
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