基于知识图谱链路预测的西药药物风险知识发现OA
Drug Risk Knowledge Discovery for Western Medicines Based on Knowledge Graph Link Prediction
[目的/意义]药品说明书中包含的风险信息通常不完整,部分新的不良反应仅能在药品实际临床使用中才能发现.文章提出了一种基于知识图谱链路预测的药物风险知识发现方法,以便及时准确地识别药品说明书中缺失的风险知识.[方法/过程]以8 152种西药的药品说明书作为研究数据;在完成本体构建、数据标注和模型训练的基础上,使用UIE模型从研究数据中联合抽取实体和关系三元组;提出一种新型知识图谱链路预测方法CompGCN-RotatE,并在多个数据集上与经典RotatE方法进行性能对比实验;最后进行实证研究.[结果/结论]研究结果表明,该方法比经典RotatE方法在MRR、Hits@3、Hits@10指标上均有较大提升,研究数据集上性能分别达到58.7%、65.6%和80.5%.该方法能有效发现药品说明书中未提及但实际能被监测到的药物风险知识,这为我国药物警戒工作提供新思路.
[Purpose/significance]The risk information contained in drug instructions is usually incomplete,and some new adverse reactions can only be discovered in actual clinical use.This paper proposes an information organization and knowledge discovery method for pharmacovigilance,in order to timely and accurately identify missing risk knowl-edge in drug instructions.[Method/process]Drug instructions of 8 152 Western medicines are collected as the research data;On the basis of ontology construction,data annotation,and model training,the UIE model is used to jointly ex-tract entity and relationship triplets from the research data;A new knowledge graph link prediction method Comp-GCN-RotatE,is proposed,and performance comparison experiments are conducted with classical RotatE on multiple datasets;Empirical research is conducted by using the proposed method.[Result/conclusion]Compared to the classical Rotate method,research results show that our method has significant improvements in the three indicators,MRR,Hits@3 and Hits@10,and achieve performance of 58.7%,65.6%and 80.5%respectively on the research data.The method proposed can effectively discover drug risk knowledge that is not mentioned in drug instructions but is actual-ly monitored,providing new ideas for pharmacovigilance in China.
魏建香;马恒远;孙越泓;杜文文;胡乐天
南京邮电大学管理学院,南京 210003||南京邮电大学图书馆,南京 210023南京邮电大学管理学院,南京 210003南京师范大学数学科学学院,南京 210023南京邮电大学管理学院,南京 210003南京邮电大学管理学院,南京 210003
社会科学
知识图谱链路预测知识推理风险预测药物警戒
knowledge graphlink predictionknowledge reasoningrisk predictionpharmacovigilance
《科技情报研究》 2026 (1)
45-56,12
国家社会科学基金重点项目"面向药物警戒的领域知识库构建与应用研究"(编号:23ATQ009)江苏省社会科学基金一般项目"基于图谱融合的突发公共卫生事件跨领域影响机制研究"(编号:23TQB007).
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