山葵内生细菌群落结构及其多样性OA
Community Structure and Diversity of Endophytic Bacteria in Wasabi
山葵作为一种兼食用和药用的高价值经济作物,其生长条件苛刻,种植难度大,导致产量少,难以满足日益增长的市场需求.研究其内生细菌有利于山葵的种植和开发山葵内生细菌生物资源.为探究山葵内生细菌群落结构及多样性,以山葵须根、根茎和叶片部位的内生细菌为研究对象,对其进行高通量测序.结果表明,山葵须根、根茎和叶片中共得到操作分类单元(OTU)数766个,3个部位分别为478个、642个和320个,3个部位共有为235个;物种分类显示,山葵中内生细菌共有35个门、85个纲、207个目、358个科和766个属.在门水平上,山葵根茎和叶片部位内生细菌的最优势细菌门是变形菌门(Proteobacteria),而须根中内生细菌的最优势细菌门是放线菌门(Acti-nobacteriota);在属水平上,山葵须根、根茎和叶片部位内生细菌的最优势细菌属分别是列契瓦尼尔氏菌属(Lecheva-lieria)、葡萄球菌属(Staphylococcus)和金黄杆菌属(Chryseobacterium);对山葵内生细菌功能预测表明,山葵内生细菌主要与新陈代谢、环境信息处理和遗传信息处理等相关.山葵不同部位内生细菌群落结构具有一定的差异,物种具有丰富的生物多样性,研究可为山葵的种植和开发山葵内生细菌生物资源提供理论依据.
Wasabi as a high-value economic crop with both edible and medicinal uses,has stringent growth conditions and high cultivation difficulty,resulting in low yields that are insufficient to meet the growing market demand.Studying its endophytic bacteria can facilitate its cultivation and promote the development of biological resources derived from these endophytic bacteria.To investigate the community structure and diversity of endophytic bacteria in wasabi,high-throughput sequencing was performed on endophytic bac-teria in the roots,stems,and leaves of wasabi.The results showed that a total of 766 OTU were obtained from the roots,stems,and leaves of wasabi,among which 478,642,and 320 OTU were obtained from these three parts respectively;235 OTU were shared among these three parts.Species classification revealed that there were 35 phyla,85 classes,207 orders,358 families,and 766 genera of endophytic bacteria in wasa-bi.At the phylum level,the most dominant bacterial phylum for endophytic bacteria in wasabi stems and leaves is Proteobacteria,while the most dominant bacterial phylum for endophytic bacteria in wasabi roots was Actinobacteria.At the genus level,the most dominant bacterial genera for endophytic bacteria in roots,stems,and leaves of aquila were Lechevalieria,Staphylococcus,and Chryseobacterium respectively.The functional prediction of endophytic bacteria in wasabi indicated that they were mainly related to me-tabolism,environmental information processing,and genetic information processing.In summary,the com-munity structure of endophytic bacteria in different parts of wasabi varied to some extent,and the species had rich biodiversity.This study provided a theoretical basis for wasabi cultivation and the development of wasabi's endophytic bacterial biological resources.
廖婕珂;时小东;秦小波
成都大学食品与生物工学院,四川 成都 610106成都大学食品与生物工学院,四川 成都 610106四川省自然资源科学研究院,四川 成都 610015
轻工纺织
山葵内生细菌高通量测序生物资源
wasabiendophytic bacteriahigh-throughput sequencingbiological resources
《成都大学学报(自然科学版)》 2026 (1)
22-29,8
四川省科技厅科技计划项目(2024ZYD0188)
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