帕米尔牦牛FGF10基因克隆及组织表达OA
Cloning and Tissue Expression of FGF10 Gene in Pamir Yak
本研究旨在探究牦牛FGF10基因的结构和功能,并分析其在帕米尔牦牛8个组织中的表达规律.以帕米尔牦牛肌肉组织cDNA为模板,采用PCR技术克隆FGF10基因的CDS区,通过生物信息学方法对该基因序列进行分析,结合qRT-PCR对帕米尔牦牛8个不同组织样本的FGF10基因表达水平进行定量检测.结果表明,帕米尔牦牛FGF10基因的编码序列(CDS区)长度为642 bp,共编码213个氨基酸.同源性比对结果表明,帕米尔牦牛与野牦牛和家牛的相似性最高,为100%;与小家鼠的相似性最低,为90.1%.生物信息学分析结果显示,帕米尔牦牛FGF10蛋白的分子式为C1049H1639N299O307S13,原子总数、不稳定指数和总平均亲水指数分别为3307、45.07和-0.358,表明该蛋白为稳定性亲水蛋白.信号肽分析证明FGF10蛋白属于分泌型蛋白,且含跨膜螺旋结构,经亚细胞定位分析发现,该蛋白主要分布在胞外环境中.其分子结构中包含2个N糖基化位点,同时存在47个潜在磷酸化位点.此外,FGF10蛋白的二级结构以无规则卷曲为主要构成形式,与FGFR1、FGFR2和FLT1等蛋白存在互作关系.FGF10基因在8个组织中的表达规律分析结果表明,不同组织间的表达存在差异,其中,背最长肌组织中的相对表达量最高,显著高于其余7个组织(P<0.01).
This study aimed to investigate the structure and function of the yak FGF10 gene and explore its expression patterns in eight tissues of Pamir yak.This experiment used the cDNA of the muscle tissue of Pamir yak as the template and cloned the CDS region of the FGF10 gene by PCR technology.The gene sequence was analyzed by bioinformatics methods,and the expression level of the FGF10 gene in eight different tissue samples of Pamir yak was quantitatively detected by qRT-PCR.The results indicated that the coding sequence(CDS)region of the FGF10 gene in Pamir yak was 642 bp in length and encoded a total of 213 amino acids.The homology comparison results showed that the simila-rity between Pamir yak and wild yak as well as domestic cattle is up to 100%;And the lowest similarity is the house mouse,which was 90.1%.The results of bioinformatics analysis showed that the molecular formula of the FGF10 pro-tein in Pamir yak was C1049H1639N299O307S13,and the total number of atoms,instability index and total average hydro-philic index were 3 307,45.07 and-0.358,respectively,indicating that this protein was a stable hydrophilic protein.Signal peptide analysis confirmed that FGF10 protein is a secreted protein containing transmembrane helical structures.Subcellular localization analysis revealed that this protein is primarily distributed in the extracellular environment.Its molecular structure included two N-glycosylation sites and 47 potential phosphorylation sites.Furthermore,the secon-dary structure of the FGF10 protein is predominantly composed of random coils,and it interacts with proteins such as FGFR1,FGFR2,and FLT1.Analysis of the expression patterns of the FGF10 gene in 8 tissues indicated differences among the tissues,among which the relative expression level in longissimus dorsi tissue was the highest,and signifi-cantly higher than the other 7 tissues(P<0.01).
邓婧瑛;贾建磊;陈倩;王佟;于沁冉;张明昊;马超凡;李宁;包鹏甲;阎萍
青海大学农牧学院,西宁 810016青海大学农牧学院,西宁 810016齐鲁师范学院,济南 250200中国农业科学院西部农业研究中心,昌吉 831100||农业农村部青藏高原畜禽遗传育种重点实验室,兰州 730050青海大学农牧学院,西宁 810016||农业农村部青藏高原畜禽遗传育种重点实验室,兰州 730050农业农村部青藏高原畜禽遗传育种重点实验室,兰州 730050农业农村部青藏高原畜禽遗传育种重点实验室,兰州 730050中国农业科学院西部农业研究中心,昌吉 831100中国农业科学院西部农业研究中心,昌吉 831100||农业农村部青藏高原畜禽遗传育种重点实验室,兰州 730050中国农业科学院西部农业研究中心,昌吉 831100||农业农村部青藏高原畜禽遗传育种重点实验室,兰州 730050
农业科技
帕米尔牦牛FGF10基因基因克隆组织表达
Pamir yakFGF10 genegene cloningtissue expression
《中国草食动物科学》 2026 (2)
21-29,9
青海省昆仑英才高端创新创业人才培养拔尖人才项目(QHKLYC-GDCXCY-2023-154)青海大学实验(实践)课程建设项目(SYKC-2023-03)深圳市科技计划项目(KCXF20201221173205015)新疆天池英才项目(CTYC-TP2023)
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