首页|期刊导航|海南医科大学学报|转录组学测序鉴定CpG ODN对牙周炎基因疫苗的免疫增强作用

转录组学测序鉴定CpG ODN对牙周炎基因疫苗的免疫增强作用OA

Identification of the immune enhancement effect of CpG ODN on periodontitis gene vaccine by RNA sequencing

中文摘要英文摘要

目的:通过转录组测序从分子层面分析CpG ODN佐剂增强牙周炎基因疫苗预防作用的潜在机制,并筛选出关键基因和信号通路用于后续研究.方法:将9只4~6周雄性Sprague-Dawley大鼠分成3组,通过鼻黏膜滴注方式对大鼠进行免疫,并于第7周处死.提取脾脏总RNA后进行RNA-seq建库和测序,通过基因本体论(Gene Ontology,GO)和京都基因及基因组百科全书(Kyoto Encyclopedia of Genes and Genomes,KEGG)路径富集分析筛选差异表达基因(differentially expressed genes,DEGs).将筛选所得DEGs传至STRING数据库建立蛋白质-蛋白质相互作用(protein-protein interaction,PPI)网络图,并采用Cytoscape软件进一步绘制网络图,通过RT-qPCR对关键基因进行验证.结果:综合GO、KEGG、PPI筛选出Oas2、Irf7、Np4、Defa11及Camp共5个关键基因,这些候选基因可能在牙周炎基因疫苗免疫机制中起关键作用.经RT-qPCR对关键基因验证显示,实验结果与转录组测序分析一致.结论:实验结果与基于转录组测序分析牙周炎基因疫苗预防效果的转录组测序结果一致,并筛选出5个参与CpG ODN佐剂与牙周炎基因疫苗协同作用的关键基因,在基因水平上初步探索了牙周炎基因疫苗的免疫机制.

Objective:To analyze the potential mechanism by which CpG ODN adjuvants enhance the preventive effect of peri-odontitis gene vaccines at the molecular level by transcriptome sequencing and to screen out key genes and signaling pathways for follow-up research.Methods:A total of nine 4‒6 week-old male Sprague-Dawley rats were randomly divided into three groups.The rats were immunized by intranasal instillation,and euthanize at the 7th week.After total RNA was extracted from the spleen,RNA-seq library construction and sequencing were performed.Gene Ontology(GO)and Kyoto Encyclopedia of Genes and Ge-nomes(KEGG)pathway enrichment analysis were used to screen for differentially expressed genes(DEGs).The screened DEGs were transferred to the STRING database to establish a protein-protein interaction(PPI)network map,and the Cytoscape soft-ware was used to further draw the network map.RT-qPCR was used to validate key genes.Results:Based on GO,KEGG,and PPI,five key genes were screened,including Oas2,Irf 7,Np4,Defa11 and Camp.These candidate genes may play a key role in the immune mechanism of periodontitis gene vaccines.The verification of key genes by RT-qPCR showed that the results of the experiment were consistent with the transcriptome sequencing analysis.Conclusion:The results of the experiment are consistent with the transcriptome sequencing analysis of the preventive effect of periodontitis gene vaccines based on transcriptomic sequenc-ing,and screens out five key genes involved in the synergistic effect of CpG ODN adjuvant with periodontitis gene vaccines,which provides a preliminary exploration of the immune mechanism of periodontitis genetic vaccines at the genetic level.

王汝佳;王月月;陈彬;白国辉

遵义医科大学口腔医学院,贵州 遵义 563000||贵州省教育厅口腔疾病研究重点实验室,贵州 遵义 563000贵州省教育厅口腔疾病研究重点实验室,贵州 遵义 563000遵义医科大学口腔医学院,贵州 遵义 563000||贵州省教育厅口腔疾病研究重点实验室,贵州 遵义 563000遵义医科大学口腔医学院,贵州 遵义 563000||贵州省教育厅口腔疾病研究重点实验室,贵州 遵义 563000

医药卫生

CpG ODN牙周炎基因疫苗RNA-seq测序

CpG ODNPeriodontitisGenetic vaccineRNA-seq sequencing

《海南医科大学学报》 2026 (5)

383-390,8

This study was supported by the National Natural Science Foundation of China(82160181)Zunyi Science and Technology Plan Project[Zunshikehe HZ(2024)No.343]Guizhou Provincial Department of Education Youth Science and Technology Talent Growth Project[Qianjiaohe KY(2022)No.276] 国家自然科学基金项目(82160181)遵义市科技计划项目[遵市科合HZ字(2024)343号]贵州省教育厅青年科技人才成长项目[黔教合KY字(2022)276号]

10.13210/j.cnki.jhmu.20250425.002

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