基于网络药理学和分子对接技术探讨益肾排毒颗粒治疗慢性肾脏病的作用机制OA
Exploration on the mechanism of action of Yishen Paidu Granules in the treatment of chronic kidney disease based on network pharmacology and molecular docking technology
目的 运用网络药理学和分子对接技术,解析益肾排毒颗粒治疗慢性肾脏病(CKD)的分子作用机理.方法 通过TCMSP、HERB等数据库检索并构建益肾排毒颗粒的有效化学成分,利用GeneCards、OMIM、DisGeNET等数据库获取CKD的相关靶点信息.采用Cytoscape软件构建"成分-疾病-靶点"网络,并筛选关键活性成分与核心作用靶点.基于R语言软件执行生物信息学分析.运用分子对接技术检验核心靶点和关键成分结合力.结果 共筛选出 82 种有效成分(其中 80 种可作用于CKD交集靶点),215 个交集靶点,确定 5 个关键成分(槲皮素、山柰酚、木犀草素、汉黄芩素、7-O-甲基-异微凸剑叶莎醇)及 12 个核心靶点(TP53、AKT1、HIF1A、CASP3、JUN、FOS、IL6、IL1B、EGFR、TNF、MMP9、STAT1),交集靶点在 2982 个GO条目和 194 条KEGG通路中显著富集,主要包括PI3K-AKT、IL-17、TNF、MAPK、AGE-RAGE、p53 等信号通路.分子对接结果表明,5 种关键成分与 12 个核心靶点的结合力(结合能≤-5 kcal/mol)均较稳定,其中汉黄芩素-FOS组结合力最佳(结合能≤-9.5 kcal/mol).结论 益肾排毒颗粒可能通过其多种活性成分、多靶点改善肾脏功能.未来的研究应进一步验证这些假设,并深入探讨益肾排毒颗粒中各种活性成分之间的协同作用及其具体作用机制.
Objective To elucidate the molecular mechanism of Yishen Paidu Granules in the treatment of chronic kidney disease(CKD)by network pharmacology and molecular docking approaches.Methods The effective chemical components of Yishen Paidu Granules were retrieved and constructed through TCMSP,HERB,etc,and the relevant target information of CKD was obtained using GeneCards,OMIM,DisGeNET,etc.A"component-disease-target"network was constructed using Cyto-scape software,and key active ingredients and core therapeutic targets were screened.Bioinformatics analysis was performed with R software,and molecular docking was employed to verify the binding affinity between core targets and key components.Results A total of 82 active ingredients were screened(among which 80 could act on the intersecting targets of CKD),215 in-tersecting targets were finally obtained,and 5 key ingredients(quercetin,kaempferol,luteolin,wogonin,7-O-methylisomu-cronulatol)and 12 core targets(TP53,AKT1,HIF1A,CASP3,JUN,FOS,IL6,IL1B,EGFR,TNF,MMP9,STAT1)were identified.The intersection targets were significantly enriched in 2982 GO entries and 194 KEGG pathways,mainly included PI3K-AKT,IL-17,TNF,MAPK,AGE-RAGE,p53 and other signaling pathways.Molecular docking results showed that binding affinity(binding energy≤-5 kcal/mol)between the five key components and the 12 core targets was relatively sta-ble,with the baicalein FOS group having the best binding affinity(binding energy≤-9.5 kcal/mol).Conclusion Yishen Paidu Granules may improve renal function through multi-component and multi-target mechanisms.Future studies should fur-ther validate these hypotheses and deeply explore the synergistic effects among various active ingredients in Yishen Paidu Gran-ules and their specific mechanisms of action.
伍玉娟;王琳;潘丽月;王小勇;钟建
广西中医药大学第一附属医院肾内科,广西 南宁 530000广西中医药大学第一附属医院肾内科,广西 南宁 530000广西中医药大学第一附属医院肾内科,广西 南宁 530000广西南宁市中医医院内分泌老年病科,广西 南宁 530000广西中医药大学第一附属医院肾内科,广西 南宁 530000
医药卫生
网络药理学分子对接益肾排毒颗粒慢性肾脏病
network pharmacologymolecular dockingYishen Paidu Granuleschronic kidney disease(CKD)
《右江医学》 2026 (2)
113-121,9
广西壮族自治区中医药管理局中医药适宜技术开发与推广项目(GZSY2024030)
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