马里亚纳海沟挑战者深渊沉积物异养细菌的分离培养及分类鉴定OA
Isolation and Taxonomic Identification of Cultivable Heterotrophic Bacteria from Deep Sediment of the Mariana Trench
为探究马里亚纳海沟深部沉积物可培养异养细菌的多样性,本文以2020年7月从挑战者深渊10 816 m处采集的柱状沉积物为研究对象,选取沉积物表层及不同深度处采集的样品,尝试通过多种富集及分离培养方式提高极端环境样品中的海洋细菌可培养性,分别在4、16和28℃下,采用2种固体培养基(MA和R2A)直接涂布培养和3种富集培养基(IMB、IMB-DMSP和IMB-Rpf)富集培养,对获得的517株异养细菌进行16S rRNA基因序列比对,并对潜在新型细菌进行初步分类鉴定.研究发现,分离出的517株细菌分属于4门(变形菌门(Proteobacteria)、厚壁菌门(Firmicutes)、放线菌门(Actinobacteria)和拟杆菌门(Bacteroidetes))、8纲、30目、42科、74属和144种.不同的富集策略可分离出不同的海洋细菌,利用IMB-Rpf培养基可培养出更多的微生物种类,复苏因子DMSP和藤黄微球菌(Mcrococcus luteus)培养液上清的添加对沉积物中不同的可培养微生物类群具有选择性富集效果,且不同深度沉积物之间的微生物类群存在差异.从上述4个门中共筛选出51株代表潜在新分类单元的细菌,其中包含3个潜在新属和41个潜在新种.这些潜在新分类单元的细菌大多数分离自添加了复苏因子的富集培养基,其中有2株属于鞘脂杆菌纲(Sphingobactenia),该纲细菌以往未在马里亚纳海沟沉积物中被分离出来.本研究结果将为后续科学研究提供大量的深海菌株资源,并为深海极端环境下微生物的分离和培养提供新思路.
To investigate the diversity of culturable heterotrophic bacteria in deep-sea sediments from the Mariana Trench,this study focused on a sediment core collected from the Challenger Deep at a depth of 10 816 meters on July,2020.Samples from the surface and various depths within the sediment core were selected,and multiple enrichment and isolation techniques were employed to enhance the cultur-ability of marine bacteria from extreme environments.Cultivation was performed at three temperatures(4,16,and 28 ℃)using two solid media(MA and R2A)for direct plating,and three enrichment media(IMB,IMB-DMSP,and IMB-Rpf)for selective cultivation.A total of 517 strains of heterotrophic bac-teria were obtained,and preliminary identification of potentially novel bacterial taxa was conducted based on 16S rRNA gene sequence comparisons.The results revealed that the isolated 517 strains be-longed to 4 phyla(Proteobacteria,Firmicutes,Actinobacteria,and Bacteroidetes),8 classes,30 or-ders,42 families,74 genera,and 144 species.Different enrichment strategies yielded distinct bacterial isolates,with the IMB-Rpf medium enabling the recovery of a broader diversity of microbial species.The addition of revival factors such as DMSP and supernatants from Mcrococcus luteus had selective en-richment effects on various culturable microbial populations in the sediments.Additionally,composi-tional differences in the cultured bacterial species were observed among different sediments depths.51 strains from the 4 phyla represented potential new taxonomic units,including 3 potential new genera and 41 potential new species.Notably,2 strains of them belonged to the class Sphingobacteriia,which have not previously been isolated from Mariana Trench sediments.The research results will provide a substantial resource of deep-sea bacterial strains for future scientific studies and offer new insights into the isolation and cultivation of microorganisms from extreme deep-sea environments.
黄蓉;刘荣华;刘吉文;张晓华
中国海洋大学海洋生命学院,山东 青岛 266003中国海洋大学海洋生命学院,山东 青岛 266003中国海洋大学海洋生命学院,山东 青岛 266003||青岛海洋科技中心海洋生态与环境科学功能实验室,山东 青岛 266237中国海洋大学海洋生命学院,山东 青岛 266003||青岛海洋科技中心海洋生态与环境科学功能实验室,山东 青岛 266237
生物科学
马里亚纳海沟深部沉积物异养细菌富集培养分离鉴定
Mariana Trenchdeep sedimentheterotrophic bacteriaenrichment cultureisolation and identification
《中国海洋大学学报(自然科学版)》 2026 (2)
60-70,11
国家自然科学基金项目(92251303)山东省自然科学基金项目(ZR2024JQ006)资助Supported by the National Natural Science Foundation of China(92251303)the Natural Science Foundation of Shandong Province(ZR2024JQ006)
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