南方碱蓬MYB基因家族鉴定及关键耐盐基因功能验证OA
Identification of MYB Gene Family in Suaeda australis and Functional Verification of Key Salt-tolerant Genes
MYB作为植物中最重要的转录因子家族之一,在植物生长发育调控及非生物胁迫响应中发挥重要作用.本研究以南方碱蓬(Suaeda australis)为材料,通过全基因组鉴定和生物信息学分析,共鉴定出104个SaMYB基因家族成员,分为1R-MYB(34个)、R2R3-MYB(66个)、3R-MYB(3个)和5R-MYB(1个)4个亚类.系统发育分析结果显示,R2R3-MYB家族成员可被划分为20个亚族,同一亚族成员的基因结构与保守基序具有相似性.理化性质分析表明,SaMYB蛋白等电点为4.69~9.7,氨基酸长度为89~1563 aa,分子量为 9.99~170.02 kD.共线性分析发现,南方碱蓬SaMYB基因与甜菜(Beta vulgaris)、拟南芥(Arabidopsis thaliana)和水稻(Oryza sativa)分别存在96、89和47对同源基因,且该基因家族中存在10对片段重复和3对串联重复事件,其中8对基因受到纯化选择作用.启动子顺式元件分析显示,SaMYB基因启动子区富含激素响应和非生物胁迫相关的调控元件.通过转录组测序和qPCR验证,发现Sau00119、Sau00120、Sau19637、Sau02923、Sau08091 和Sau13875 在盐胁迫下表达显著上调.通过农杆菌(Agrobacterium tumefaciens)介导的本氏烟草(Nicotiana benthamiana)瞬时过表达系统证实Sau19637能够显著激活下游CBF4基因的表达,酵母单杂交实验证明,Sau19637可直接结合CBF4基因启动子并调控其转录,从而增强植物的耐盐性.本研究为进一步解析南方碱蓬的耐盐分子机制提供了新的候选基因和调控靶点.
As one of the most important transcription factor families in plants,MYB plays a crucial role in regulating plant growth and development as well as responding to abiotic stress.In this study,the MYB gene family in S.australis was systematically investigated through genome-wide identification and characterized by bioinformatics analyses,which led to the identification of 104 SaMYB genes classified into 4 subfamilies:1R-MYB(34 members),R2R3-MYB(66 members),3R-MYB(3 members),and 5R-MYB(1 member).Phylogenetic analysis divided the R2R3-MYB members into 20 distinct subgroups;members within each subgroup shared comparable gene structures and conserved motifs.Physicochemical profiling demonstrated that SaMYB proteins exhibited isoelectric points(pI)ranging from 4.69 to 9.7,amino acid lengths varying between 89~1 563 aa,and molecular weights spanning 9.99~170.02 kD.Synteny analysis identified 96,89,and 47 homologous gene pairs between S.australis and B.vulgaris,A.thaliana,and O.sativa,respectively.The SaMYB gene family underwent 10 segmental and 3 tandem duplication events,with 8 gene pairs under purifying selection.Cis-element analysis demonstrated that SaMYB promoters were enriched with regulatory elements responsive to phytohormones and abiotic stresses.Transcriptome sequencing and qPCR validation revealed significant upregulation of Sau00119,Sau00120,Sau19637,Sau02923,Sau08091 and Sau13875 under salt stress conditions.Agrobacterium-mediated overexpression of Sau19637 in Nicotiana benthamiana significantly activated the expression of the downstream CBF4 gene.Yeast one-hybrid assays confirmed that Sau19637 could directly bind to the CBF4 promoter to regulate its transcription,thereby enhancing plant salt tolerance.This study provides new candidate genes and regulatory targets for further elucidating the molecular mechanisms of salt tolerance in S.australis.
朱北艳;李俊奇;樊佳鑫;沈周洋;钟颂焕;张秀梅;瞿印权
浙江海洋大学水产学院,舟山 316022浙江海洋大学海洋科学与技术学院,舟山 316022浙江海洋大学水产学院,舟山 316022浙江海洋大学水产学院,舟山 316022浙江海洋大学水产学院,舟山 316022浙江海洋大学水产学院,舟山 316022浙江海洋大学水产学院,舟山 316022
农业科技
南方碱蓬SaMYB基因家族盐胁迫酵母单杂交瞬时表达
Suaeda australisSaMYB gene familySalt stressYeast one-hybridTransient expression
《农业生物技术学报》 2026 (2)
306-322,17
浙江省自然科学基金探索青年项目(LQ24D060004)舟山市科技计划项目(2023C41004)浙江省大学生科技创新活动计划(新苗人才计划)(2024R411A006)
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