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猕猴桃bHLH基因家族鉴定及其在果实贮藏条件下的表达分析OA

Identification of the bHLH Gene Family in Kiwifruit(Actinidia chinensis)and Its Expression Analysis Under Fruit Storage Conditions

中文摘要英文摘要

猕猴桃中抗坏血酸(ascorbic acid,AsA)含量丰富,但在采后成熟过程中AsA含量会显著下降,AsA代谢受转录因子调控.碱性螺旋-环-螺旋(basic helix-loop-helix,bHLH)基因家族参与多种代谢途径.为了探讨bHLH基因家族在猕猴桃AsA代谢中的作用,本研究利用生物信息学方法,对中华猕猴桃(Actinidia chinensis)bHLH基因家族进行鉴定,进而分析这些基因的染色体位置、理化性质、保守基序、进化关系、同义密码子使用频率以及蛋白质互作网络,预测其互作关系.通过qRT-PCR分析bHLH转录因子(transcription factors,TFs)及AsA代谢基因在采后贮藏过程中的表达模式.结果表明,共鉴定出144个成员,分别分布在29条染色体上,且大多数成员均具有典型bHLH保守基序,具有光响应、胁迫响应、MYB结合相关、激素响应、防御和应激响应、胚乳和分生组织表达、昼夜节律7类顺式作用元件.根据进化树分析,将144个bHLH成员划分为25个亚族,其中有7个相对同义密码子使用频率大于2.0,表明AcbHLH基因家族对密码子使用具有较强的偏好性.蛋白互作网络分析表明,60个成员间存在互作.qRT-PCR 分析表明,AcbHLH072、AcbHLH120、AcbHLH134 和 AcbHLH067 与 AsA 含量显著相关,此外,8个AsA代谢相关基因均具有bHLH结合的顺式作用元件,推测AcbHLH072、AcbHLH120、AcbHLH134和AcbHLH067可能通过调控抗坏血酸过氧化物酶2(ascorbate peroxidase 2,AcAPX2)、AcAPX8、L-半乳糖脱氢酶 1(L-galactose dehydrogenase 1,AcGalDH1)、半乳糖醛酸尿苷酰转移酶 2(galacturonic acid uridylyltransferase 2,AcGalUR2)及AcGalUR3等相关基因表达影响AsA的合成分解,从而调控果实AsA代谢途径.本研究为猕猴桃bHLH基因家族参与抗坏血酸代谢的作用机制提供了参考.

Kiwifruit is rich in ascorbic acid(AsA),but the AsA content significantly decreases during postharvest ripening.AsA metabolism is regulated by transcription factors.The basic helix-loop-helix(bHLH)gene family has been proven to be involved in various metabolic pathways.To explore the role of the bHLH gene family in AsA metabolism in kiwifruit,this study conducted bioinformatics identification of the kiwifruit(Actinidia chinensis)bHLH gene family.The physicochemical properties,chromosomal localization,conserved motifs,evolutionary relationships,synonymous codon usage frequency,and protein interaction networks of these members were analyzed to determine gene nomenclature and classify the gene family,predicting their interaction relationships.Finally,by analyzing the expression patterns of bHLH transcription factors(TFs)and AsA metabolic genes during postharvest storage,combined with the prediction of cis-acting elements in the promoters of functional genes,the potential links between bHLH TFs and AsA metabolism were inferred.The results showed that the 144 members were distributed across 29 chromosomes,with most members possessing typical bHLH conserved motifs.The cis-acting elements included 7 major categories:Light response,stress response,MYB binding,hormone response,defense and stress response,endosperm and meristem expression and circadian rhythm.According to the phylogenetic tree analysis,144 bHLH members were divided into 25 subfamilies,of which 7 members having a relative synonymous codon usage frequency greater than 2.0,indicating a strong codon usage preference in the AcbHLH gene family.Protein interaction network analysis revealed interactions among 60 members.qRT-PCR analysis indicated that AcbHLH072,AcbHLH120,AcbHLH134,and AcbHLH067 were significantly correlated with AsA content.Additionally,8 AsA metabolism-related genes all contained cis-acting elements for bHLH binding,suggesting that AcbHLH072,AcbHLH120,AcbHLH134,and AcbHLH067 might regulate AsA synthesis and degradation by influencing the expression of related genes such as ascorbate peroxidase 2(AcAPX2),AcAPX8,L-galactose dehydrogenase 1(AcGalDH1),galacturonic acid uridylyltransferase 2(AcGalUR2),and AcGalUR3,thereby modulating the AsA metabolic pathway in the fruit.This study provides insights into the mechanisms by which the kiwifruit bHLH gene family participates in ascorbic acid metabolism.

张诗颖;周靓;毛甲绪;王露凡;沈淑铃;郑小林;宦晨

浙江工商大学食品与生物工程学院,杭州 310018浙江工商大学食品与生物工程学院,杭州 310018浙江工商大学食品与生物工程学院,杭州 310018浙江工商大学食品与生物工程学院,杭州 310018浙江工商大学食品与生物工程学院,杭州 310018浙江工商大学食品与生物工程学院,杭州 310018浙江工商大学食品与生物工程学院,杭州 310018

农业科技

猕猴桃bHLH基因家族抗坏血酸生物信息学

KiwifruitbHLH gene familyAscorbic acidBioinformatic

《农业生物技术学报》 2026 (1)

47-65,19

国家自然科学基金(32372407)浙江省属高校基本科研业务费专项资金资助(QRK22005)

10.3969/j.issn.1674-7968.2026.01.005

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